Shewanella carassii: TUM17387_05850
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Entry
TUM17387_05850 CDS
T07543
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
scaa
Shewanella carassii
Pathway
scaa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM17387_05850 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaa03032
]
TUM17387_05850 (dnaB)
Enzymes [BR:
scaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TUM17387_05850 (dnaB)
DNA replication proteins [BR:
scaa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TUM17387_05850 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
PAXNEB
GvpD_P-loop
DUF1421
DUF5410
CbiA
nSTAND3
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BCV65226
LinkDB
All DBs
Position
638353..639759
Genome browser
AA seq
468 aa
AA seq
DB search
MQQQGAFKAKDKRRDVQVDALKLPPHSIEAEQSVLGGLMLDAEAWDKVSEAVVREDFYSR
SHRLIFGAMQKLVENGQPIDLITVSEQLELTDELEDAGGFTYLGEIAKNTPSAGNILSYA
EIVRERAVVREMIRVAHEIADAGYNPEGRDSGALLDLAETKVFKIAEQRANANEGPEGIK
TILEKTVDKIEQLYNNPHNGVTGVSSGFSDLDKMTAGFQSGDLIIVAARPSMGKTTFAMN
LCEYAALNENKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGI
MLEQGKMYIDDSSGLTPTEVRSRARRIAREYGGLSMIMVDYLQLMQVPALADNRTLEIAE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YNDDSPDKGTAEIIIGKQRNGPIGRVRLTFQGMFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaaggtgcctttaaggccaaagacaagcgaagagacgtccaggttgacgcg
ctcaagctgcctccccattccattgaggcggagcaatccgtgctcgggggactgatgctg
gatgcagaggcctgggacaaggtgtccgaggccgtggtcagagaagacttttactcccgt
tcccacaggctgatttttggtgccatgcaaaagctggtagaaaacggccaacccatagat
ttgattacggtttcagaacaactggaactgactgacgagctggaagatgccggtggtttt
acctatctgggtgagatcgccaagaatacccccagcgccggtaatattctttcctacgcc
gaaatcgtgcgcgagcgtgccgtggtgcgggagatgatccgggtagcacatgagattgcc
gacgcaggttacaacccagaggggcgggactcaggcgccttgctggacttggccgaaacc
aaggtgttcaagatagccgagcagcgcgccaacgccaacgagggcccggaggggatcaag
accatcctcgaaaaaaccgtcgacaagattgagcagctgtacaacaacccgcacaacggt
gtgaccggggtatccagcggcttctccgatctggataagatgaccgcaggtttccagtcc
ggtgacctgatcattgtcgcggcccgtccttccatgggtaagaccacctttgcgatgaac
ctgtgtgaatacgcggcgctcaatgaaaacaagccagtgcttattttcagtctcgagatg
ccctcggaacagatcatgatgcgtatgctggcgtcgcttggccgggtagatcagaccaag
atacgtaccggccagttggatgatgatgattgggcgcgggtgtcctctaccatggggatc
atgctcgagcagggcaagatgtatatcgatgacagctcgggcctgacgccgaccgaagtg
cgcagcagggccaggcgtatcgcccgggaatacggcggtctgtctatgatcatggtcgac
tacctgcagttgatgcaggtgccggcgctggccgataaccggaccctggaaattgctgaa
atctcccgctcgctcaaggccctggccaaggagctggagatcccggtgatcgccctgtca
cagctgaaccgctcattggagcaaagggccgataaacgcccggtaaactctgacttgcgt
gaatccggctctatcgagcaggatgcggaccttatcatgtttatttatcgtgacgaggtg
tataacgacgattcgcccgataaaggcacggcagagatcatcataggtaagcaacgtaac
ggccccatcggccgggtcaggctgactttccaggggatgttctcccgttttgacaattac
gccggtccgcaatttgaagaggactaa
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