Shewanella carassii: TUM17387_06130
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Entry
TUM17387_06130 CDS
T07543
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22051
miniconductance mechanosensitive channel
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_06130
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_06130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
BCV65254
LinkDB
All DBs
Position
complement(666806..670012)
Genome browser
AA seq
1068 aa
AA seq
DB search
MVRACILLFCLFFVASAQANSPLGLDKRLGINQQNTEALSQEQQLAQLEKSIQQLADTTR
SYQELQLNFENRRQHLYDLLQEAAAPLKPERHQDLDQQASMAYLRLSELKESETSLSQAN
SAMLKRHSELPAEIVKIRQALLQQQKTQAVATDNTSKALQQAQLLLLEQQLTTLESELAV
SQQKRELHQLQLQLVRKQLQQQELLIEQLNRAITDARQQQVNATLAETLNSEAGTHDSLT
TELSQANQKYGQQLQQLTEQTAQTIALQEQAEKQDQSHSKQLDNIKEQISWVKMNPVFGE
RFLQILQSLPKPPNQEHLQTQIADARLNRYQIEQQFAANEQLLTTQAYSNESQLRLLESQ
QALLNQLLKGYDTYLSELAKLKSKYELLTDSYQRLKSTLNEHLFWVPNAYSISKLWLTDL
QRSSLWLWQQTDLPEIKQGLTELSPYWSWWIILAVLCLVAQDILTPRFKTMMRECEAPVG
KVTQDKFIYTIQTLVISAGYSLFKPFPIVAAGLIMLQSNSNPIQAIGMGVLAIGSLYQLY
RFIYLLALDKGLLIGHFKRPQEVIRQGQQRFRRFVIMAMPLVGVMGFTEILDSSLVRNSI
GRGAFILFCIMLFMLYRDVLTLSRRYRESHLDDKNKRLLQKLLWLLLLLVPPLSAVLAFR
GYYFTAFQMLLQLQLSLLLGLGFLLLYQLLKRWMLIERRRIAFDRAKARRAERLAQREKG
DTSSSNNDHQDTYEEPVVDLETMSSQSLGLVRSLLLLAFLACLVGLWTQTHTALFSFLDG
ITLWTTTTTGIGGVEQPLPITMKSLVFGAIVVGFSMMIATNLPGLLELTILQKLDLSPGT
GFAITTVTRYLVVFIGIVIGFATLGMEWSKLQWLIAALTLGLGFGLQEIFANFISGLIIL
FEKPVRIGDTVTIRDLTGTVSKIKIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPIT
RVIIYVSVARDSDPARVEAALYQAVKECENALETPEPEVWFAGFGKHTQDYEVRAYAKDM
SSRWPLRHDLHKRISKKLKENQLELAYPQLEVHISNTHNKDTSGIIRG
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagcctgcatcctgctgttttgtctcttttttgtcgcctccgcccaggccaac
tcgccactggggttggataaacgcctgggaattaatcaacaaaacacggaagccctgtcg
caggagcaacaactggcgcagctggaaaaaagcattcagcagctggccgacacaacccgc
agctatcaggaactgcaactcaatttcgagaatcggcgccaacatctttatgatctgctg
caagaagccgccgcgccacttaaacccgaacgccatcaggatctggatcagcaggcctcc
atggcctatctgcgcctttccgaactgaaagagagtgaaaccagcctcagccaggccaac
agcgccatgctcaagcgccacagcgagttacctgccgaaatagtcaaaatcagacaggcg
ctgctgcaacagcaaaaaactcaggcagtggccactgacaataccagcaaagcactgcaa
caggcgcagttgttattgctggagcaacagctcaccacgctggaaagcgagttggcagtc
agccaacaaaagcgcgaactgcatcagttacaactgcaactggtacgcaagcagttgcag
caacaagaactgcttatcgagcagcttaaccgcgccattaccgatgccaggcagcagcaa
gtcaacgccacactggccgaaaccctcaattctgaggccggtactcacgatagtctgacc
acagagctaagccaggccaatcaaaagtatggtcagcagttgcagcaattgactgagcag
acggcgcagaccatagcccttcaggaacaagcggagaagcaggatcagtcccacagcaag
caactggacaacatcaaagagcagatcagctgggtcaagatgaacccggttttcggtgag
cgctttttgcagatcctgcagtcactgccaaagcccccgaaccaagaacacctgcaaacc
cagatagccgatgccagactcaatcgctatcagattgagcagcagtttgccgccaatgag
caactgctaacgacccaggcctatagcaatgaatctcagttacgactgcttgaatcacaa
caggccttgctgaatcagttattgaaaggctatgacacttatctcagtgaactggccaag
ctcaagagcaagtatgagctgctcaccgacagttatcagagactcaagtccaccctcaat
gaacacctgttctgggtacccaatgcctacagcatcagcaagctgtggctaacggatctg
cagcgctccagtctctggctctggcaacaaaccgacctgcctgagataaagcaggggctg
accgaactgagtccatactggtcctggtggatcatcctggcggtgttgtgtctggtggcc
caggatattctcacccccagattcaagaccatgatgcgcgaatgtgaggcgccggtcggc
aaggtgacccaggataaatttatctacaccatccagacattagttatcagcgccggttac
agcttgttcaaaccctttcccatagtggcggccggcttgattatgctgcagtccaacagt
aatcccattcaggccataggcatgggcgtactggctataggcagcctgtaccagctctat
cgcttcatctatctgctggcactggacaagggcctgctcataggccatttcaaacggcca
caagaggtgatccgtcaagggcaacagcgttttcgccgctttgtcatcatggccatgcct
ctggtgggcgtcatgggctttaccgaaattctcgactcctctctggtgcgcaacagcata
ggccgcggtgcctttattctgttctgtatcatgctatttatgctctatcgggacgtactg
actctgtcccgtcgctatcgtgaaagccatctggacgacaagaataagcgtctgctgcaa
aagctgctgtggctactgctgttgctggtaccaccgctgagcgccgtgttggcattcagg
ggctattatttcaccgccttccagatgctgttgcagctgcagctttctttactgctggga
ctcggctttctgttgctgtaccagttgctgaaacgctggatgttgattgaaaggcgccgc
atcgccttcgatcgcgccaaggcccgccgggccgagcgtctggcgcagcgggaaaaaggt
gatacctcatcgagcaacaacgatcatcaggacacctatgaagagccggtagtcgatttg
gaaaccatgtccagccaatcactgggtttggtgagatccctgctgctgctggcgtttctg
gcctgcctggtcggcctgtggacccaaacccacaccgccctattcagcttcctcgatggc
attactctttggacgacaacgactaccggaataggcggagtcgagcagccgctgcccatc
accatgaaatcactggtatttggcgctatcgtggtcggcttttccatgatgatagccacc
aaccttcccggcttgttggagctgactatactgcaaaaactggatctctccccgggaacc
ggctttgccatcaccactgtgacccgttacctggtggtctttatcggtattgtcatcggc
tttgccaccctggggatggagtggtccaagctgcaatggttaattgcagcgctgactctg
ggtcttggttttggtctgcaggagatcttcgccaactttatctcgggccttatcatactg
tttgaaaagccggtgcggatcggcgataccgtcactattcgcgaccttacaggtacggta
tccaagatcaaaatccgcgcgaccaccatcatagattgggacagaaaagagattatcatc
cccaacaaggcctttatcacagagcagctaattaactggtcgctgtcggatcccattacc
cgggtgatcatctatgtttcggtcgccagggattcagatcctgcccgggtggaggccgcg
ctctatcaggcagtgaaagagtgtgaaaacgcactggagaccccagaaccggaagtctgg
tttgccggtttcggcaagcacactcaggactatgaagtcagggcttacgccaaagatatg
tcttcccgctggccgctgcgccacgatctgcacaagcggatcagcaagaagctcaaggaa
aaccagttggagttggcctaccctcagctcgaagtgcatatcagcaacacgcacaacaaa
gacaccagcggtattatcagaggttaa
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