Shewanella carassii: TUM17387_08230
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Entry
TUM17387_08230 CDS
T07543
Symbol
ygfZ
Name
(GenBank) tRNA-modifying protein YgfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_08230 (ygfZ)
Transfer RNA biogenesis [BR:
scaa03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
TUM17387_08230 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
Reovirus_L2_GTase
Motif
Other DBs
NCBI-ProteinID:
BCV65464
LinkDB
All DBs
Position
complement(911445..912410)
Genome browser
AA seq
321 aa
AA seq
DB search
MSICVSQPDWPLDAGIPDLLISRLSHLGLLAVTGEQGRSFIHGQVTTDISSLTAEEWRWG
AHCDPKGKMLSSFRTFALGDALMLMMPRDTLAADLPQLKKYAVFSKAELVDASDDYSLLG
VAGAKAAAWLAEQFPGFNAEQQVSTFDGGVVLQDDERFILVLPKAQAEALCQQQPLVDAS
AWQELEILAAYPNLPASHMGQFVPQMCNLQAINGISFTKGCYMGQETVARMKYRGGNKRA
LYILKGKATVDVTPETTLEMALDEGFRKGGSIIEAVQRNGELLLTAVLANDTEVGAQFRI
ADDENSELTVLPLPYSLEEQE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttgcgtttctcagcccgattggccactggatgccggcattccggatctgctt
atttcccgtctctctcacttgggtctgctcgccgttaccggtgaacagggccgcagcttt
attcacggtcaggtcaccacagatatcagctctctcacggccgaggagtggcgttggggt
gcgcactgcgatcccaagggcaaaatgctttcaagcttcagaacctttgccctgggtgat
gctctgatgttgatgatgccaagagataccctggctgccgacctaccgcaactaaagaaa
tatgcggtattcagtaaggccgaactggtcgatgccagtgacgattacagccttctgggt
gttgccggcgccaaggcagccgcttggctggctgaacagttcccgggcttcaacgccgag
caacaagtcagcaccttcgatggcggcgtagtgctacaggacgacgaacgctttattctg
gtactgcccaaggcccaggccgaagccttgtgtcagcaacagccactagtcgatgccagt
gcctggcaagagctggaaatcctcgccgcctaccctaacctgccggcatcacacatgggc
cagtttgtaccgcaaatgtgcaacctgcaggccatcaatggcatcagcttcaccaagggt
tgctatatgggccaggaaaccgtggccagaatgaagtatcgcggcggcaacaagcgagcc
ctctatatcctcaagggtaaagccactgtcgatgtcaccccagaaaccacgctggaaatg
gcgttggatgaaggttttcgtaagggcggtagcattattgaagccgtacaacgaaatggc
gagttactgctgaccgcagtgctggccaatgacactgaagtcggcgcccaattccgcatc
gccgatgatgaaaatagcgaactgacggtactgcctctgccctactctctggaagagcag
gagtaa
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