Shewanella carassii: TUM17387_09150
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Entry
TUM17387_09150 CDS
T07543
Symbol
ispB
Name
(GenBank) octaprenyl-diphosphate synthase IspB
KO
K02523
octaprenyl-diphosphate synthase [EC:
2.5.1.90
]
Organism
scaa
Shewanella carassii
Pathway
scaa00900
Terpenoid backbone biosynthesis
scaa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
TUM17387_09150 (ispB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scaa01006
]
TUM17387_09150 (ispB)
Enzymes [BR:
scaa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.90 all-trans-octaprenyl-diphosphate synthase
TUM17387_09150 (ispB)
Prenyltransferases [BR:
scaa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
TUM17387_09150 (ispB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BCV65556
LinkDB
All DBs
Position
complement(1020744..1021715)
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AA seq
323 aa
AA seq
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MDLTAIRQLADADMQAVNQLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARALD
YSGEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSF
QMMTELESMKVLQVLANATNILAEGEVLQLMNCNDPDTTEASYMRVIYCKTAKLFEAATR
LAGVLAGCDSEMETALADYGKYLGTAFQLTDDLLDYTADAEELGKNIGDDLAEGKPTLPL
IYAIAHGTETQRQMIRQAIEQGDGTEHIEEIINALNTCGALEYTQQRAYEEADKAVAALS
ILPESDYKQALVGLAKIAVARSH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatttaactgctatccgtcagctggctgacgccgacatgcaagccgtcaatcaactg
atctacaaacaactcgaatctgatgttgccctgatcaatcaattggggttctacatcatc
aacggtggcggcaagcgtatgcggccgttactgtcgattctggcggccagagcactcgac
tatagcggtgaagcacacttgaagctggctgccatcatcgagtttattcacacggcttcg
ctgcttcacgatgacgtggtggatgaatccactctgcgccgcggacgggaaaccgccaat
gccctgtttggcaacagtgccagcgtgctggtcggtgacttcctttatacccgctccttc
cagatgatgaccgagttggagtcgatgaaggttttgcaggtactggccaatgccaccaat
atactggcagagggcgaagtactgcagttgatgaactgcaacgatccggataccacagaa
gccagctatatgcgggtgatctactgcaaaacagccaaactgtttgaagctgcaacccgt
ctggccggtgtgctggccggctgcgatagcgaaatggaaacggcgctggccgactatggc
aaatacctgggcaccgccttccagttgaccgatgatctgctggactacaccgccgatgcc
gaagaactgggcaagaacataggtgatgacctcgccgaaggtaagcccacactaccgctg
atctacgccatagcccatggcacagaaacacaaagacagatgatccgccaggcgattgag
caaggtgacggcacagagcatatcgaagagatcatcaatgcgctcaacacctgtggcgca
ctggaatatacccaacaaagggcctatgaagaggctgataaggccgtagcggcgctttcg
atactgcctgagtccgattacaagcaggcgctggtaggcctggctaaaatcgccgtagcc
cgcagtcactga
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