Shewanella carassii: TUM17387_09590
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Entry
TUM17387_09590 CDS
T07543
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
scaa
Shewanella carassii
Pathway
scaa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TUM17387_09590 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_09590 (lptF)
Transporters [BR:
scaa02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
TUM17387_09590 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
BCV65600
LinkDB
All DBs
Position
1067606..1068718
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AA seq
370 aa
AA seq
DB search
MIVFRYLIREVLKAQIAVLSVLLAIFISQQFVRILADASDGEFPASLVMTLIGLNLPELA
VLILPLSLFLGILLAHGRMYAENEMVVFHGVGVSEWYVTRVTLILALLNSLFTGYLALYV
APWAQDKQHAVLEKAQSEAGLAALVQGRFQTSANGRAVLFVEKISKDNELEKVFVAQLPD
AEDESGVTNLVVAHGGRVVEDATGGQRLKLDDGVRYQGAPNRVDYQVIEFGGYQMQLKEQ
EVDERDRKLSAVPFKELLNTPGPEAVAELHWRLAIPLAIPLMTLIAVPMARVNVRQGKFA
KVFPAVLLYLGYFGLMVAGRKALQDEVIPAWLGMWWIHASALLMGILLIGKGRPLGTRLA
GLFKRRGAAA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttagatacttgatccgcgaagttttgaaggcacaaatagcggtgctttct
gtcttgttagctatttttatcagccagcaatttgtccgcatcctggctgatgcctccgat
ggcgaatttcccgcttccctggtgatgactctgatcggcctcaatctgcctgaactggca
gtgctaattctacccttgagtctatttctggggatcttgctcgctcatggccgcatgtat
gcagaaaacgagatggtggtctttcatggggtcggcgtcagcgaatggtatgtcacccgg
gtgaccctgatcctggcgttgctcaacagcctgtttaccggttatctggcgctctatgtc
gcgccctgggcgcaggacaaacaacacgcggtcttggaaaaggcccagtcagaagccggg
ctggccgccctggttcaaggacgttttcaaaccagtgccaacggccgggctgtgctcttt
gttgaaaaaatcagcaaagacaatgagctggaaaaagtctttgtggcccagcttcccgat
gcggaagacgagagcggtgttaccaacctggtcgtggcccatggtggccgggtagtggaa
gacgcaaccggtggtcagcgactcaagctcgatgacggcgtgcgttatcagggagcgccg
aaccgggtggattaccaggtgattgagttcggcggctatcagatgcagctcaaagagcag
gaagtggatgagagggatcgcaagttatctgccgtgcctttcaaggaactgctcaataca
ccggggccggaagccgtggccgaacttcattggcgactggccattccgctggctatcccc
ttgatgacgctgattgctgtgcctatggctcgggtcaatgtacgccagggcaagtttgcc
aaggtatttccggcggtattactctatcttggctattttggcttgatggtcgccgggcgc
aaggcattgcaggatgaggtgatccctgcctggctggggatgtggtggatccatgcctcg
gcattgctgatgggcatcttgttgataggtaagggcagacctctggggactcgactggcg
gggctattcaaacgccggggggccgcagcatga
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