Shewanella carassii: TUM17387_11210
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Entry
TUM17387_11210 CDS
T07543
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scaa03000
]
TUM17387_11210 (nhaR)
Transcription factors [BR:
scaa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TUM17387_11210 (nhaR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR
Motif
Other DBs
NCBI-ProteinID:
BCV65762
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All DBs
Position
1233423..1234331
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AA seq
302 aa
AA seq
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MSHLNYNHLYYFWMVHKQGSVTKAAETLCLTPQTITGQIRTLEERLKGSLFKRVGRNLAP
TELGELVFRYADKMFSLSYEMLDVLNYRKDESILFEVGIADALSKALASRVLMSVIPANS
SMHLACYESTHESLMTRLREHKLDMILSDCAGESLKYPEILSKKLGECGIAFFSAQEFKS
GFPECLEEGPLLIPSRRTSLGQQLYRWFDEKRLNVKILGEFDDAAMMKAFGYFRKGIFVA
PSIYQQDILEHNIRLLGETMEIKEEYHVMFAERMIQHPAVQRLLETDFGDLFAGRDLQVQ
QF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatttgaactataaccacctatattacttttggatggtgcataagcaagggtct
gtgaccaaggctgccgagacactctgtttaactccccagaccattaccggccagataagg
acgctggaggaaaggctcaaggggagtctgttcaagcgggtggggcgcaacctggcccca
actgaattgggcgagctggtatttcgctacgccgacaaaatgttcagcctctcttatgag
atgctcgatgtgctcaactatcgcaaggatgagtccatcctgttcgaggtgggtattgcc
gatgccctctccaaggcgctggccagtcgagtgttgatgtcggtaatcccggccaacagc
tctatgcacctagcctgttatgaatcgactcacgagagcctaatgacccggctcagggaa
cataagttggatatgatactgtcggattgtgccggagagtccctcaagtatcctgaaatt
ctctccaagaagctgggagagtgcggtatcgccttcttctcggcgcaggagttcaaaagt
ggtttccccgaatgtctggaggagggccccttactgatccccagtcggcgtacctccctg
ggccagcaactctatcgctggtttgatgagaaacgtctcaatgttaaaatcctcggtgag
ttcgacgatgcggctatgatgaaggcctttggctatttccgtaaggggatatttgttgcc
ccctctatttatcagcaggatattctcgagcacaacatacgtctgctcggtgaaaccatg
gagatcaaagaggaatatcatgtgatgtttgccgaacggatgatccagcatccggcggtg
cagcgcttgttggaaaccgattttggtgacttgttcgccggtcgagaccttcaagtgcag
cagttttga
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