Shewanella carassii: TUM17387_12100
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Entry
TUM17387_12100 CDS
T07543
Name
(GenBank) hypothetical protein
Organism
scaa
Shewanella carassii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
PP-binding
Ketoacyl-synt_C
Acyl_transf_1
KR
adh_short
KAsynt_C_assoc
PKS_DH_N
Motif
Other DBs
NCBI-ProteinID:
BCV65851
LinkDB
All DBs
Position
complement(1338482..1346083)
Genome browser
AA seq
2533 aa
AA seq
DB search
MSQAQASQIDKRLNKRLKDTPIAIVGMASLFAGSRYLNQFWDLICDKIDAITQVPADRWQ
VADYFDPDKKAADKSYCKRGGFIPEVDFNPMEFGLPPNILELTDTSQLLSLVVAKEVLED
AGIHEGSDYDRDRIGITLGIGGGQKISQSLNARLQYPVLKKVFRESGVSEQDSEMLIRKF
QDQYIHWEENSFPGSLGNVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMALTELTEGRS
DMMLTGGVCTDNSAYMYMSFSKTPAFTSDEQIKPFDADSRGMMIGEGIGMVALKRLEDAE
RDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALQRAYDDAGFPPHTLGLMEAHGTGT
AAGDVAEFSGLNAVMSQDNPELQHIALGSIKSQVGHTKSTAGTAGVIKAALALHHKVLPP
TINVKQPNPKMAVEQSPFYLNTQTRPWMPRTDGTPRRAAVSSFGFGGTNFHLVLEEHSPE
LPKHPSRLRRTPLPLLFCAPDKPTLEQEISALLKTLESDAHDDLETLCAPYRLGSQTQVQ
GPRLGLLACDTIELQQKLQQALNKLQSTAEEQPQTRWQQQGIEYRSGPLTEALTAALFAG
QGSQYLQMGSGLTQLYPELRAEFAAADREFSRQGIADKYGMGPLSARVFPIAKFTPQASK
EDELALANTRFAQSAIGALGMGQFTLLCQAGFQADMLAGHSFGELSALRAAGALSRESYY
ALAFARGDAMASVPEDKDPGAMSAVILPSAAERNTLEQLLQTEPEVQIANINSPVQLVIA
GASEAVARLNLKLNEAGLRAIALPVSGAFHTPLVAHAQQPFAEAIAHQGLSDAKTPLYVN
ATGDKLAQDAESLRANLEQHMLKQVRFSEQIESMYRDGARIFVEFGPKNTLARLAQATLG
DRAAECLFLSLDSPSCIDSLAADTELKQALLSLALAGLPLTDPDAYRAVQTQAKHKASPM
TIKLGASNYISPSTAQKMAASLKEGRVSQQTKIVEKVVEKIVEIPVAAASQNPSQPSQAT
APQAANGLPANSGSGLQQFFSAQQQLAELHQQFLNIPLQYGNSVQQLLAEQVKLATAGKA
IPDSLNQTLAMFHQHQAETLKIHNDFIQSQNLGAQQLLQQLQGGAVLPHSVLTNAVLTKI
EQAQAVPVSEPMPAQAAAPVTHAAAPVKAASSPQQPSQVLQSRPQAQAPAPAVAVTTAKP
STGVEELMLQVVADKTGYPTEMLELGMDMEADLGIDSIKRVEILGTVQDALPELPQLDAA
TLSECRTLGQIVDYLQQSAGVDSSVQPEPIQPSPALSNTAQSNTASDVTALMLQVVADKT
GYSTEMLELGMDMEADLGIDSIKRVEILGTVQDALPELPQLDAATLSECRTLGQIVDYLQ
QSAGVNTSVQPPRAQSNAAQSNTAHANQNDVTALMLQVVADKTGYPTEMLELGMDMEADL
GIDSIKRVEILGTVQDELPELPPLDAATLSECRTLGQIVDYLQQSAGVNSSVQPSPIQSN
TASDVTALMLQVVADKTGYPAEMLELGMDMEADLGIDSIKRVEILGTVQDQLPELPQLDA
ATLSECRTLGQIVDYLQQSAGVDSSAQPEPVSNQSDVTAIMLQVVAEKTGYPAEMLELGM
DMEADLGIDSIKRVEILGTVQDQLPELPQLDAASLSECRTLGQIIDCFAGSNAEHAAELL
TQTDEMPNTQPSVALPPHSGVSLKKLPAADRFSGASAEALFAANSCALLLDDGHNAGVLA
KKLTDSGISVTLVRPAATDSQSALDSKLPILTLASNDDAGVEALIAGLEQQVAIYIHLQP
QLPREQLEELMPLNITAKTQVQLSFLFAKHLSPAWQTPTKGRRAFITVARMDGQLGFSGQ
PCELNQSALFGLTKTLAQEWPQVHCRALDLAPELDASALASQVMDALYSPSQDPLEWGKS
AAGRVTLVATSADDKNAADTSLAPCRLDSSDKILVTGGAKGVTLDCALALARQSGSHFIL
AGRSKALALEAFPDWAKGLESGQLKAAAITALLAKGQKPSPKEVEALIKPLVNALEIHAA
LKRFEAIGASAEYLSLDVSNPDAVASTLAPIQALAPISGLIHGAGVLADKHIADKTLAEL
ELVTGTKVGGLSALLRALAPNKKAAEHLKLLALFSSAAGFYGNTGQSDYAMANEILNKTA
HRLHHELPTTRVISFNWGPWDGGMVNAALKQMFESRGVYVIPREAGAKLFAEAILARSEP
QLLIGSSMQGPGGKQGLNHTDAPEAQASPQTLSRSIKRQELALLEDHCIGGNPVWPTVCA
LQWMLQSAQSLFGGDWRAVDYKLLKGVVFDSDEKRLQLNLTLGTDGELQASISCDERPQY
QATLLPLMQQPLMQQPASQPLAHVSMPETGESGPEIGEGELQVRQGSELYHSGALFHGPQ
LQAITEVLQFDDQGLSCRYRLPDAASSEDRALIQQDALLQAMLIWARLKYDAASLPSSLA
ALWQNALLPENDTGLIRLQVTKHSSRQLSADLALFNAEGQLQTGLENAKVTISKGLNAAF
EPAKAATGNRERP
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacaagcctctcagatagacaaacgcctcaacaaaaggctgaaagacacg
ccgattgccatagtcggcatggcgagcctgtttgccggcagtcgttatctgaaccagttt
tgggatctgatctgcgacaagatagatgccatcacccaagtgcccgccgaccgctggcaa
gtggcagactattttgaccccgacaagaaagccgccgacaagagttactgcaagcgcggc
ggctttatcccggaagtggatttcaaccccatggagtttggtctgccgcctaatatcctc
gaactgaccgacacctcacagctgctgtcgctggtggtagccaaagaggtgttggaggat
gcaggtatccatgaaggctcggactatgaccgcgaccgcatcggtatcaccttggggatt
ggcggtggccagaagatcagccaaagcctcaatgccaggctgcaataccctgtgctgaaa
aaggtgtttcgcgagagtggcgtcagtgagcaggacagcgaaatgctgatccgcaaattc
caggaccaatatatacactgggaggaaaactcctttcctgggtcactcggcaatgttatc
gccggtcggattgccaaccgtttcgatctcggcggcatgaactgtgtggtcgacgccgcc
tgtgccggctcgctggcggcaatgcggatggcgctcaccgagctgaccgaaggccgcagc
gatatgatgctcaccggaggcgtctgcaccgacaactctgcctatatgtacatgagcttc
tccaagaccccggcctttaccagcgacgagcagataaagccgttcgacgccgactcccgc
ggcatgatgataggcgaaggcataggcatggtggcgctgaaacgcctggaggatgccgag
cgcgacggtgaccgcatctatgcggtgatcaagggggttggcgcctccagcgacggtaag
ttcaagagcatttacgcgccgcgccccgaaggccaggccaaggcgctgcagcgggcctat
gatgatgccgggttcccgccccatactctgggcctgatggaagcccacggcacaggtacg
gccgccggtgatgtggccgaattcagcggcctcaacgccgtaatgagccaggataatcct
gaactgcaacatatcgccctgggttcaatcaagtcacaggtgggccataccaagtcgacc
gccggcaccgccggggtgatcaaggcggcattggcgctgcatcacaaggtgttgccgccc
accatcaatgtgaagcagcccaaccccaagatggcagtggagcaatcgcccttctatctc
aacactcaaacccgcccctggatgccaagaaccgacggtacgccaaggcgcgccgccgtc
agctcctttggctttggtggcaccaacttccacctggtattggaagagcacagccccgaa
ttacccaagcacccctcgcgcctgagacgcacgcctttgccgctgctgttttgcgcacca
gacaaacctacgctggagcaagagataagcgctctgctcaagacgctggagtcagatgcc
catgacgaccttgaaaccctgtgcgcgccctatcgcctcggcagccagacacaggtacaa
ggccccaggctgggactgcttgcctgcgacaccatagagctgcagcaaaagctgcaacag
gccttgaacaagctgcaaagcactgcggaagaacagccgcaaacccgttggcaacaacag
ggaatcgagtaccgcagtgggcctttgactgaggccttgaccgccgccctgtttgccggt
caaggcagtcagtatctacagatgggctctgggctaacccagctctatcccgagcttcgc
gccgaatttgccgccgccgaccgtgagttttcccgccagggcatagccgacaagtacggc
atgggccccttgtcggcgcgggtattcccgatagccaaattcacgccccaggccagcaaa
gaggatgaactggcactggccaatacccgctttgcccaaagcgccatcggcgccctcggc
atggggcagtttactctgctttgtcaggccggattccaggcggatatgctggccggtcac
agctttggtgagctgtcggcgctgcgcgccgctggtgccttgagccgtgagagctattac
gcgctggccttcgcccgaggcgatgccatggccagcgtccccgaggataaagacccgggc
gccatgagcgccgttatcctgccttcagccgctgagcgcaatactctcgagcagctgctg
cagactgaacccgaggtgcagatagccaatatcaacagcccggttcagcttgtgattgcc
ggcgcgagtgaagctgtggcccggctcaacctcaaactgaacgaggcaggtttacgcgcc
atagcgctgccggtatccggtgccttccacactccgctggtggcccatgcgcagcaaccc
tttgccgaggcgattgcccaccagggcttgagcgatgcgaaaacgcctctgtatgtcaat
gccacaggtgacaagctggcacaggatgccgaaagcctcagagccaacctggagcaacat
atgctcaagcaggtgcgcttcagtgagcagatagagagcatgtaccgggacggcgccaga
atatttgtcgagtttggcccgaaaaacaccctggccaggttggcacaagccaccttgggc
gatcgcgccgccgaatgcctgttcctgtcgctggacagcccaagctgtatcgattccctg
gccgccgacactgagctgaagcaagccctgctcagcctggcattggcgggcctacctctg
acagatcccgatgcctatcgcgccgtacaaacccaggccaaacacaaggcctcaccgatg
actatcaagctcggtgccagtaactatatcagcccgtcgaccgcccagaagatggcggcc
tcactcaaagagggccgggtcagtcaacagacaaaaatagtcgagaaagtcgtggaaaaa
atcgtcgagatcccagtagcggccgcaagccagaacccgagtcaaccgagccaagctaca
gcgccacaagctgcaaacggcctcccagcaaacagcggcagcggattacagcagtttttc
agcgcccagcaacagttggccgagctgcatcagcagtttctgaatatcccattgcaatat
ggcaacagtgtgcagcaactgctcgcagagcaagtaaaactggcgacggccggcaaagcg
attcctgacagcctcaatcagaccctggccatgttccaccagcaccaggccgagacgtta
aagatccacaacgactttattcagtcgcaaaatctcggtgcccagcagttgttgcaacaa
cttcagggcggcgctgtgttgccacattctgtgttgaccaatgctgtgttgaccaagata
gagcaggcccaagcagtaccagtgtcagagcctatgcccgcccaggctgcagcgcctgta
actcatgccgcagcgccagtcaaagcagcaagctcgccacagcaacccagccaagtgcta
cagagtcggcctcaagctcaagccccagccccagcagtagccgtaaccactgccaagcca
agcacaggtgtcgaagagctgatgctgcaagtggtggcagataagacaggctaccccacg
gaaatgctcgagctggggatggatatggaagccgatctcggtatcgactccatcaagcgg
gtggaaattctcggtacagtgcaggatgccttgcctgagctgccacaattggatgccgcc
accttgagtgaatgccgcactctgggacagatcgtcgattatctgcagcaaagcgccggt
gtggattccagtgtgcaacccgagccaattcagccgagcccagccctgtcaaacacggct
caatcaaacacagctagtgatgtgacggcactgatgctgcaggtggtggccgacaagaca
ggctactccacggaaatgctcgagctggggatggatatggaggccgatctcggtatcgat
tccatcaagcgggtggaaattctcggcacagtgcaggatgccttgcctgagctgccacag
ttggacgccgccaccctaagcgaatgccgcaccctggggcagattgtcgactatctgcag
caaagcgccggagtgaacaccagtgttcagccaccccgggctcaatcaaatgcagctcaa
tcaaacactgctcatgcaaatcagaatgatgtcacggcactgatgctgcaagtggtggcc
gacaagaccggctacccgaccgaaatgctcgagctggggatggatatggaagccgatctt
ggtatcgattccatcaaacgggtggagatcttgggcacagtacaagatgaattgcctgag
ctgccgccgctggacgccgccaccttgagtgaatgccgcaccctggggcaaattgtcgac
tatctgcagcaaagcgccggagtgaattcaagcgttcagccaagcccaattcaatcaaac
actgctagtgatgtgacggcactgatgctgcaggtagtggccgacaagaccggctacccg
gccgaaatgctcgagctggggatggatatggaggccgatcttggtatcgattccatcaag
cgggtggagatactcggcacagtgcaggaccaattgcctgagctgccacaattggatgcc
gcaaccttgagtgaatgccgcaccctggggcagatagtcgattatctgcagcaaagcgcc
ggagtggattcaagcgcgcagcctgagccagtttcaaatcagagtgatgtcacggcaatc
atgctgcaggtagtggctgagaagaccggctacccggccgaaatgcttgaactggggatg
gatatggaggccgatctcggtatcgattccatcaagcgggtggagattctcggcacagtg
caggaccaattgccagagctgccacagctggacgccgcaagcttaagcgaatgccgcacc
ttgggacagatcatagattgttttgccggttcaaacgctgagcatgccgccgagctgcta
acccaaaccgatgagatgccaaacactcagccgagtgtggccttgccgccccattcggga
gtcagcctaaaaaagctgccggcggcagatagattctcaggcgcaagcgccgaggctctg
tttgccgcgaacagctgtgcgctgctgctcgatgacggccacaacgccggtgtcctggcc
aagaaactgaccgacagtggcatcagtgtcactctggtgcgcccggcggcaaccgattcg
caatcggcgctggatagcaaactgccaatcctgactctggccagcaatgatgatgccgga
gtcgaggcgctcatcgccgggctcgaacagcaagtggccatctatatccatctgcagcca
caactgccgcgggaacaactcgaagagttgatgccgctcaacatcacggccaagactcag
gtacaactgagcttcctgttcgccaagcatttgagtccagcctggcaaacgccgacaaaa
ggccgccgcgcctttatcactgtggcgcgtatggatggtcagctgggtttcagcggtcag
ccctgtgaattgaatcaaagcgccctgtttggcttaaccaagaccctggcgcaggagtgg
cctcaggtgcattgccgcgcgttggatcttgctcctgagcttgatgcctcggcgctggcc
tcgcaagtcatggatgcgctctacagcccgagccaggatccgttggagtggggcaaaagc
gccgccggcagagtgaccttggtagcgacttcggccgatgacaagaatgctgccgataca
agcctggcgccatgcaggctcgatagttcagataaaatactggtgaccgggggcgcaaaa
ggcgtcaccctggactgtgccctggcgctggcccgccaaagtggcagtcactttattctc
gccggtcgcagcaaggccttggcattggaagcattccccgattgggccaaggggcttgag
agcggtcagctaaaagcagccgcaatcaccgcgctattggccaaggggcaaaagccctcg
cccaaggaagtggaagccctgataaaacctctggtcaacgcgcttgagatacacgcagcg
ctcaagcgctttgaggccataggtgccagcgccgaatacctgagcctggatgtcagtaac
ccggatgcggtcgcgtccacactggcgcccattcaagcattggcgcctatcagcgggctg
attcacggcgccggggtgttggccgataaacacatcgccgacaagaccctcgccgaactc
gaattggttacaggcaccaaggttggcggcctctccgccttgctcagagccttggcgcca
aacaaaaaggccgccgagcacttaaaactgttggcgctgttttcctccgccgccggtttc
tacggcaacacaggccagagcgactacgccatggccaatgaaattctcaataaaaccgct
catcggctgcatcatgagttgccgaccacccgagtgatcagtttcaactggggcccctgg
gatggcggcatggtcaatgcggcgctgaaacagatgtttgagtcccgcggcgtctatgtg
atcccaagagaagccggtgccaagctgtttgccgaggcgattctggcccgctcggagccg
cagctgttgattggctccagcatgcaaggcccggggggtaaacaaggcctgaaccacaca
gatgcgccagaggcccaagctagcccgcaaaccctgagtcgcagcatcaagcgccaggag
ctggcgctgctggaagatcactgcattggcggcaatccggtatggccgactgtctgcgca
ctccagtggatgctgcaaagtgcccagagcctctttggcggcgattggcgcgccgtggac
tataagctgctcaaaggcgtggtgtttgacagtgatgaaaagcgattgcagctcaacctg
actctgggaaccgacggcgagctgcaggcgagcatcagctgtgatgagcggcctcagtat
caggcgaccctgctgcctttaatgcagcaaccgttaatgcagcagcccgccagccagcca
ctggcacatgtttctatgcccgaaacaggtgaaagtgggcccgagatcggcgaaggtgag
ctccaagtgcgtcaaggcagtgagctttatcacagcggcgccctgttccatggcccgcag
ctgcaggctattactgaggtgctgcagtttgacgaccaagggcttagctgccgataccgg
ctaccggatgccgcatcgagcgaagatcgcgccctgatccagcaagacgcactgctgcag
gccatgttgatctgggcccggctaaaatacgatgccgccagcctgccttcctcactggcg
gcgctctggcaaaacgccctgctgcctgaaaatgacaccggccttattcgcctgcaggtg
accaagcactccagccgtcagctcagcgccgatctggccctgttcaacgccgagggccag
ctgcaaaccgggctggaaaatgccaaggtcaccattagcaaggggctcaatgccgccttt
gaaccagccaaggccgccacaggtaatagagaaaggccttga
DBGET
integrated database retrieval system
