Shewanella carassii: TUM17387_12280
Help
Entry
TUM17387_12280 CDS
T07543
Symbol
phoB
Name
(GenBank) DNA-binding response regulator
KO
K07657
two-component system, OmpR family, phosphate regulon response regulator PhoB
Organism
scaa
Shewanella carassii
Pathway
scaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TUM17387_12280 (phoB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scaa02022
]
TUM17387_12280 (phoB)
Two-component system [BR:
scaa02022
]
OmpR family
PhoR-PhoB (phosphate starvation response)
TUM17387_12280 (phoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
BCV65869
LinkDB
All DBs
Position
1363641..1364330
Genome browser
AA seq
229 aa
AA seq
DB search
MTARILIVEDELAIREMLTFVMEQHGYTTSAAEDFDSALALLKEPYPDLILLDWMFPGGS
GIQFAKRLKQDEFTRQIPIIMLTARGEEEDKVKGLEVGADDYITKPFSPKELVARIKAVL
RRAAPTRLEETIDVQGLTLDPVSHRVTVGDSVLEMGPTEFRLLHFFMTHPERVYSREQLL
DNVWGTNVYVEDRTVDVHIRRLRKAVELSGHDKLIQTVRGAGYRFSTRI
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaggattttaatagtagaagatgagttggctatccgtgagatgctgactttt
gttatggaacaacacgggtacaccaccagtgccgccgaggactttgattctgcgttggca
ctgctcaaggaaccttatccggatcttattctgctggactggatgtttcccggcggcagc
ggtattcagtttgccaagcgattgaagcaagatgagtttacccgtcagatccctattatc
atgctcactgcccgcggtgaggaagaggacaaggtcaaaggcctggaagtgggcgccgat
gactatattaccaaaccgttttcccccaaggagttggtggcccgcatcaaggcggttctc
agacgcgccgcgccaacccgcctggaagaaaccatagatgtgcagggcctgaccctggat
cctgtcagccatagggtcacagtgggggattctgtgctggagatggggccgaccgagttt
cgtttgctgcacttctttatgactcacccggaacgggtctacagccgtgagcagttgctg
gacaatgtctggggcaccaatgtttatgtcgaagatagaactgtggatgtgcatattcgt
cgcttaaggaaagccgtggagctgtccgggcacgataaactgatccaaacggttcgcggc
gcaggttaccgcttctctacccgtatctag
DBGET
integrated database retrieval system
