Shewanella carassii: TUM17387_12360
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Entry
TUM17387_12360 CDS
T07543
Symbol
barA
Name
(GenBank) histidine kinase
KO
K07678
two-component system, NarL family, sensor histidine kinase BarA [EC:
2.7.13.3
]
Organism
scaa
Shewanella carassii
Pathway
scaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TUM17387_12360 (barA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scaa01001
]
TUM17387_12360 (barA)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scaa02022
]
TUM17387_12360 (barA)
Enzymes [BR:
scaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
TUM17387_12360 (barA)
Protein kinases [BR:
scaa01001
]
Histidine kinases
NarL family
TUM17387_12360 (barA)
Two-component system [BR:
scaa02022
]
NarL family
BarA-UvrY (central carbon metabolism)
TUM17387_12360 (barA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_4
Response_reg
HATPase_c
HisKA
Hpt
HAMP
PDE8A_N
HAMP_2
DUF4795
DUF4349
Motif
Other DBs
NCBI-ProteinID:
BCV65877
LinkDB
All DBs
Position
complement(1372039..1374822)
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AA seq
927 aa
AA seq
DB search
MNSANNMTKYSLRSWVLVLALAPTILVGILLGSYFTINRFYELEDTLIEQGSNIIEPLAI
ASEVGLAANNREATKRLLAAAQLNKSTLVKSIAIFDADNQLFVTSHYHKDFEIMRYKGAI
SDLARTEYDQVGDSLVLRAPIFAAGSLLAVDDAPGANEKPLGYISLLLNKEKALLEQHRA
AVAAFIIVLIGVQLNLLFTFRLVKNVTQPITDMVRVVAKIREGKLDTRLKGNLIGELDLL
KRGINAMAGSLSEYHEEMQQNIDQATSDLRETLEQIEIQNVELDLAKKRALEASRIKSEF
LANMSHELRTPLNGVIGFARQLLKTPLHASQMEYIRTIERSANNLLSIINDILDFSKLEA
GKMVLETMPFALRETLDDTLMLLAGSAHEKGLELVVDVAPQVPDAVSGDAMRVSQIITNL
VGNAIKFTDQGSVLLKVDISDLKEDKLLLHCEVSDTGIGIEESQQELLFQAFGQADSSIS
RRFGGTGLGLVITKRLINQMGGKIGFSSRVGKGSTFWFTLPLMTSQFPIGEPLPLEQLRG
KTVLLFEPRPLTRSVLNRRLLHWQMQVNSVHTVPQLEAELALDKAHFDYVLLGCHGFDGP
TQLQAVLKSARQVTEALIALFDCHDQEALERYIRPVVDLVLSIPASEYLMARNMIYLPQE
SELKPALPKLVEPQQRHKLNVLAVDDNPANLKLIDTLLDELVTGVTTASNGEQAVNLAKQ
RSFDLIFMDIQMPGTDGITATRLIRQDSLNRNTPIIAVTAHAINEERERILNSGMDGYLP
KPIDEAALKGVISRWLTRPKFTHFDQHTLNWELCLTQANQKQDLALDMLRMLIDSMPDTT
SDIQESLEQDDAAKMQSCVHKLHGACCYCGVPTLQKLCQTVEGGLKQGSSIAELEPEILE
LLDELTKVESAAKQVISQLSMDLTDDN
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgcgaataacatgaccaagtacagcctcagatcctgggtgctggtattggcc
ctggcccctaccattttggtcggtattcttctgggcagttactttaccataaatcgcttt
tatgagcttgaagatacgctcatagaacagggcagcaatatcatagagccgctggctatc
gccagtgaggtaggcctggccgccaataaccgcgaggccaccaaacgcctactcgccgcg
gctcagctcaacaagtcgaccttggtgaaatccatcgccatcttcgatgccgacaaccag
ctgtttgtcacctcccactatcacaaagactttgagatcatgcgctacaagggcgccatc
tcggatctggcccgcaccgaatacgatcaagtaggtgacagtctggtattgagagcgccg
attttcgccgctggcagcctgctggcggtagacgatgctcccggcgccaatgagaaacct
ctgggttatatctctttgctgctcaacaaggaaaaggcgctgctggaacagcacagagcc
gcggtggcggcttttatcatagtgctgattggggtgcagctgaatctgctgtttaccttc
cgtctggttaagaatgtgactcagccaatcacagacatggtgcgggtggtggccaaaatc
cgtgagggtaagctggatacccgattaaagggtaaccttatcggtgagctggatctgctc
aaacgggggatcaacgccatggcgggctccctatctgaatatcatgaggaaatgcagcag
aatatcgatcaggcgacctcagatctcagggaaaccctggagcagattgagatccaaaac
gtcgaactggacttggccaagaaacgagcattggaagccagtcggataaaatccgagttt
ttggccaacatgtcccacgaactgagaacgccgctcaatggcgtgataggttttgcccgt
cagctactgaaaacgccgctacatgccagtcagatggaatatatccgcaccattgaacgc
agcgccaacaacctgctcagcatcatcaacgatattctcgacttctccaagttggaagcc
gggaagatggtgctggaaactatgccgttcgccctcagggaaaccctggatgacacccta
atgctgctcgccggctccgcccatgaaaaagggctggaacttgtggtggatgtggcccct
caagtgccggatgccgtcagcggcgacgccatgcgggtcagtcagatcatcaccaatctg
gtgggcaatgccatcaagtttaccgatcagggtagcgtgctgctaaaagtggatatcagc
gatcttaaagaggacaaactgctattacactgtgaggtgtcagatacgggtatcggcatt
gaggagagtcagcaggaactgctattccaggcgttcggccaggccgattcatctatctcc
cgccgcttcggcggtaccggccttgggctggtgatcaccaagcgtctcattaaccagatg
ggaggtaagataggcttcagttcccgagtgggcaaaggctccaccttctggtttaccctg
ccgctgatgaccagccagttcccgataggtgagccgctgccactggagcagctcagaggc
aagacggtattactgtttgaacccagacccttgacccgctctgtgctcaaccgccgcttg
ttacattggcagatgcaggtcaacagtgttcacactgtgccacaattggaagccgaactt
gccctggacaaggcgcatttcgactatgtgctgctcggctgtcacggcttcgatggcccg
actcagttgcaggcagtgctcaaaagtgccagacaagtgaccgaggcccttattgcgctg
ttcgactgtcatgatcaagaggcactggagcgctatattcgccctgttgtagaccttgtt
ctgagcattcctgccagcgaatacctgatggcacgcaacatgatttatctgccacaggaa
tctgaactcaagcccgccctgcctaaactggtcgagccgcagcagcgccacaagctcaat
gtgctggcagtggatgataacccggccaacctcaagctgattgacaccctgcttgatgaa
ctggtcactggggtgaccacagccagtaatggcgagcaggcagtgaatctggccaaacag
cgcagctttgatttgatctttatggatatccagatgccgggaaccgatggcattaccgcc
acccggctcattcgtcaggactcgttgaaccgcaatacccctatcattgcggtaaccgcc
cacgccatcaatgaggagcgcgagcggatcctcaatagcggcatggatggctacctgcct
aagcctatcgatgaagccgcactgaaaggagtgatcagtcgctggctcacccggcccaag
tttacccattttgaccagcacaccctcaactgggagctgtgtctgacccaggccaatcag
aaacaggatctggcgctggatatgctcagaatgctaattgactccatgccggacaccacc
agcgacatccaggaatcgctggagcaggatgacgccgccaaaatgcagtcctgtgtccac
aaactgcacggtgcctgttgctactgcggcgtaccgacattgcaaaaactctgtcaaacc
gtggaaggcggtctcaaacaaggcagcagcattgccgagctggagccagaaatactggag
ttacttgatgagttaactaaggtagaatctgcggcgaaacaagtgatatcccaactttcg
atggatttaaccgatgacaactaa
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