Shewanella carassii: TUM17387_12510
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Entry
TUM17387_12510 CDS
T07543
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
scaa
Shewanella carassii
Pathway
scaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TUM17387_12510 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_12510 (mutS)
DNA repair and recombination proteins [BR:
scaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TUM17387_12510 (mutS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
BCV65892
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Position
complement(1389015..1391594)
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AA seq
859 aa
AA seq
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MNAVITPMDNPDLEKHTPMMRQYLSMKAQHAEMLLFYRMGDFYELFYDDAKKASELLGIS
LTARGKSGGDPIPMAGIPYHAVEGYLAKLVQLGESVAICEQIGDPATSKGPVERKVVRIV
TPGTLTDEALLQERQDNLLAAVYEGKNGFGYATLDVASGRFVIAELTTLESLEAELQRTK
PAELLYSEDFSQQSLIAGIKGKRRRPEWEFDLDTSMRLLLDQFGTKDLRGFGITDARLSL
QAAGCLMQYVKDTQRTALPHINAITRFNQSDSIVLDAATRRNLELTVNLAGGRDNTLASV
LDATATPMGSRMLQRWIHQPLRDHQQIGLRQTAVAELIASGLFEPLHDDLKALGDVERIM
ARLALRSARPRDFARLRQALALLPQLQQLLANTQSPELGRLKHQLSEFPEELALLERAIV
DNPPVLIRDGGVIRDGYHAELDEWRRLSEGASDYLQQLEVREKEQTGIATLKVGFNRVHG
YYIEVSRGQSALVPLSYQRRQTLKNTERYIIPELKEYEEKVLSSQGKALALEKQLWDELF
DLLLPKLSELQAFAMAAAELDVLSNFAERADSLNYHQPELSDKPGIHIEAGRHPVVERVS
QAPFIANPVTLSPERKMLVVTGPNMGGKSTYMRQVALITLMAHIGSFVPADKAILGPVDR
IFTRIGASDDLASGRSTFMVEMTETANILHNATAESLVLMDEIGRGTSTYDGLSLAWSAA
EYLAQRLGAMTLFATHYFELTQLAELMPQVANVHLDAMEHGDSIVFMHAVQEGAASKSYG
LQVASLAGVPASVIKAAKLKLQQLESRDHGQEPHVQAQATLQLETPPSELELLLGRLNPD
ELSPREALDLIYKLKALAN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagtgatcacgcctatggataacccggatttggaaaaacacacccctatgatg
cgccagtatctgtcgatgaaggcgcagcatgccgaaatgctgctgttttatcgcatgggg
gacttttacgagctgttttatgatgatgccaaaaaagcctccgagctcttgggtatctca
ctaactgccaggggcaagagtggcggcgatcctattcctatggcgggtattccctatcat
gcggtggaaggttatctcgccaagctggtgcagctcggtgagtcggttgccatctgtgaa
cagattggtgacccggccacgtccaaagggccggtcgagcgcaaagtggtgcgcatagtg
actcccggaactctcaccgatgaagcgctgctgcaagagcgtcaggataacttgctggcc
gccgtctacgaaggcaagaacggttttggctacgccaccttggatgtggcctccggccgt
tttgtgattgccgagctaaccacccttgaatcattagaggccgagctgcaacgcaccaaa
ccggccgaactgctctacagcgaagacttttcccaacaaagcctgattgccggcatcaag
ggcaaacgccgtcgtcccgagtgggagtttgacttggataccagcatgcgattgttgctg
gatcagtttggcaccaaagatttgcgtggttttggcataacagacgccaggctgtcactg
caggccgccggctgcctgatgcagtatgtcaaagatacccagcgcaccgccttgccccat
atcaatgccattacccgctttaaccagagcgacagcatagtgttggatgccgccacccgg
cggaatctggaactgacggtgaatcttgccggtggccgggacaatactctggcttcggtg
ctggatgcaaccgcgacccccatgggtagcaggatgttacagcgctggatccatcagcca
ctcagagatcatcaacagataggcctgcggcaaaccgcggtggcggagttgattgccagc
ggcctgttcgagccgttgcatgacgacctcaaggcgctcggtgatgtggagcggatcatg
gcgcgcctggctctgagaagcgcccgcccgagagactttgcccgtctgcgacaagcgctg
gcgctgttgccgcaactgcagcaactattggcaaacacccaaagccccgagcttggccgt
ttgaaacaccagctcagtgaattccctgaagaactcgctctgctggagcgggccattgtc
gacaacccaccggtactgattcgtgatggcggcgtgatccgcgatggttatcatgccgaa
ctggatgaatggcgccgccttagtgaaggcgccagtgactatctgcaacagttggaagtc
agggaaaaagagcaaacgggaatagccaccctgaaagtcggtttcaaccgggtacacggc
tactatatcgaagtttcccgcggccagtcggcgctggtgcccctgagctatcaaagacgc
cagacattgaaaaacaccgagcgctatatcatcccagaactgaaagagtatgaagagaaa
gtactctccagtcagggcaaggcgctggcactggaaaagcagctttgggacgagctgttc
gatctcctgctgcccaagctcagcgagttgcaggcctttgccatggcggcggccgagttg
gatgtactgagcaactttgccgagcgggccgacagcctcaactaccaccaaccggagttg
agcgataagccgggcatacatattgaagccgggcgtcaccccgtggttgaacgggtcagc
caggctccctttatcgccaacccggtaacccttagccctgagcgtaaaatgttggtggtc
acaggccccaatatgggggggaagtccacttacatgcgtcaggtggcgctgatcaccctg
atggcgcatatcggcagctttgtgccggcagataaggcaattctggggcccgttgacagg
atcttcacccgtatcggcgcctcggacgatctggcctcgggccgctccacctttatggtg
gaaatgacagaaacggccaatattctccacaatgcgaccgcagagagtctggtgctgatg
gatgagattggccgcggcacctccacctatgacggcttgtcactggcctggtcagcggca
gaatatctggcccagcgactcggcgccatgacactgtttgccacccattacttcgagctg
actcagttggcagagttgatgccccaggttgccaatgtgcatctggatgccatggagcat
ggcgacagcatagtctttatgcacgcagtgcaggaaggagccgccagcaagagctatggt
ttgcaggttgcttcactggccggtgttccagcctcggtgatcaaggccgccaaattgaaa
ctgcagcaacttgaaagtcgcgatcacggtcaagagccccatgttcaggcacaggccaca
ctgcaactggaaacaccgccatctgagcttgaacttctgcttggcaggctgaacccggat
gaactcagcccaagagaggcgctggacttaatctataaactcaaggcgttggcaaactaa
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