Shewanella carassii: TUM17387_12630
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Entry
TUM17387_12630 CDS
T07543
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
scaa
Shewanella carassii
Pathway
scaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TUM17387_12630 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_12630 (xseB)
Enzymes [BR:
scaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TUM17387_12630 (xseB)
DNA repair and recombination proteins [BR:
scaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TUM17387_12630 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TACC_C
DUF6687
DUF503
Motif
Other DBs
NCBI-ProteinID:
BCV65904
LinkDB
All DBs
Position
complement(1407687..1407926)
Genome browser
AA seq
79 aa
AA seq
DB search
MAKKPENLSFEESLNELERIVAELERGEVSLDDALKQFERGIGLVRSSQAKLEQAQQKVA
ILLAQDPQAPLSPFDVEGE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaaaacccgaaaatctgagttttgaagaatcactcaacgagctggaacgcata
gttgccgagctggaacgcggtgaagtgtcgctggacgatgcactcaaacagttcgaacgc
ggtataggcctggtgcgcagcagccaggctaaactcgaacaagcgcaacaaaaagttgcc
attctattggcccaagatccgcaggcgccattaagtccatttgatgttgagggtgagtaa
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