KEGG   Shewanella carassii: TUM17387_13020
Entry
TUM17387_13020    CDS       T07543                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
scaa  Shewanella carassii
Pathway
scaa00740  Riboflavin metabolism
scaa01100  Metabolic pathways
scaa01110  Biosynthesis of secondary metabolites
scaa01240  Biosynthesis of cofactors
scaa02024  Quorum sensing
Module
scaa_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:scaa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    TUM17387_13020 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TUM17387_13020 (ribD)
Enzymes [BR:scaa01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     TUM17387_13020 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     TUM17387_13020 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Ldh_2
Other DBs
NCBI-ProteinID: BCV65943
LinkDB
Position
1449069..1450193
AA seq 374 aa
MWSNTDIAMMSRAIMLARRGCYTTRPNPNVGCVIIDADGKIVGEGWHQRAGEPHAEVHAL
KMAADKARGATAYVTLEPCSHYGRTPPCAEALIKHGLKRVVVAMTDPNPQVAGRGIGMLQ
EAGVQVQSGLLAEQARALNPGFLSRMERNRPWVTLKLAASLDGKTALANGESKWITGPEA
RRDVQRLRARSCALLTGIETVLADDPSLNVRHAELGSLGETLSEQELIQPLRVILDSNCR
MPLDARLLKIVSPVLLVSCRPYEDEFLAALPPYVTALVLAGEDNRVDIAALLQHLSQSCN
AVLVEAGATLCGAFISAGLADELLLYQAPKLLGAAGRNLLALPNYQQIADTPAIRVTDQR
KLGNDTRLTLKIGD
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtggtccaatactgatatcgccatgatgagccgcgccataatgctggctcgccgtggc
tgctatacaacccgtcccaaccccaatgtcggctgcgtcatcatagatgccgatggcaag
attgtcggtgaaggctggcatcagcgtgccggcgagccccatgccgaagtacatgctctg
aaaatggccgctgataaggcccgcggcgctaccgcctatgtcaccctcgaaccctgcagt
cattatggtcgcacgccgccctgtgccgaagccttaattaaacatggcctcaagcgggtg
gtggtggctatgacagatcccaaccctcaggtggccggccgaggtatcggcatgttgcag
gaggccggggttcaggtgcagagtggtctcttggctgagcaggccagagcgttgaatccg
ggctttttatcgcgaatggagcgaaatcgcccctgggtcaccctcaagctggcggcgagt
ctcgatggcaagacggcgttggccaacggcgagtccaagtggataaccggccccgaggcg
cgccgcgacgtgcaaaggctcagggcccgtagctgcgctctgctcaccggcattgaaacc
gtattggccgatgacccttccttgaatgtccggcacgctgagcttggcagcctgggtgaa
accctgagtgagcaggagcttattcaaccgctgcgggtgatactcgacagcaactgccgt
atgccgctcgatgccaggttattgaagattgtcagcccggtactcttggtcagctgccgc
ccctatgaggatgagttcctagccgctttgccgccttatgtcaccgctttggtgttggcc
ggtgaagacaacagagtcgatatcgcggcgctgctgcaacacctgagccagagctgtaat
gcggtgttggtcgaggccggggcaacgctttgcggcgcctttattagtgccggactggcc
gatgagctgctgctctaccaagccccgaaactgcttggcgccgctggccgaaacctgctg
gccttgccaaactatcaacagatagccgataccccggcgatacgggtaactgatcaacgt
aagctgggcaatgatacccggcttactctcaagataggtgattga

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