Shewanella carassii: TUM17387_14060
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Entry
TUM17387_14060 CDS
T07543
Symbol
flrA
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
scaa
Shewanella carassii
Pathway
scaa02020
Two-component system
scaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TUM17387_14060 (flrA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TUM17387_14060 (flrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scaa03000
]
TUM17387_14060 (flrA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scaa02035
]
TUM17387_14060 (flrA)
Transcription factors [BR:
scaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
TUM17387_14060 (flrA)
Bacterial motility proteins [BR:
scaa02035
]
Flagellar system
Flagellar assembly proteins
Others
TUM17387_14060 (flrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
bpMoxR
AAA
AAA_7
AAA_2
Motif
Other DBs
NCBI-ProteinID:
BCV66047
LinkDB
All DBs
Position
1565268..1566545
Genome browser
AA seq
425 aa
AA seq
DB search
MVLLSDGVEDETLQSLMLKLPWQPMLLLGQSSANSSNLLGKIEEPFNYAQLTELLHFCQV
FGQVKRPQVPTSANQTKLFRSLVGRSDGIANVRHLINQVAGSDASVLVLGPSGTGKEVVA
RNIHYLSERRDGPFIPVNCGAIPPELLESELFGHEKGSFTGAISSRKGRFELAEGGTLFL
DEIGDMPLQMQVKLLRVLQERVFERVGGNKAINADVRVVAATHRDLETMIENGEFREDLY
YRLNVFPIEMPPLCERRDDIPLLLQELVSRVFNEGKGRVRFTQRAIDSLKEHAWSGNVRE
LSNLVERLTILYPGGLVDVNDLPVKYRHIDVPEYSVEVSEEQLERDALASIFNDEEPVDL
PETRFPSELPPEGVNLKDLLAELEIDMIRQALDQQDNVVARAAEMLGIRRTTLVEKMRKY
GMSKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggttctgctctctgacggtgtagaggatgagactcttcagtctctgatgctcaaatta
ccatggcagcctatgttgttgctggggcagagtagcgcaaattcctctaacttactgggt
aagattgaagagcctttcaattacgcccagttgactgaactgctgcatttttgccaggtt
tttggtcaggttaagcggccacaggtacctaccagtgccaaccagaccaagctgttccgc
agcctggtcggccgtagcgacggtattgccaatgtccgccatcttatcaatcaagtcgcc
ggttcggatgcctctgtgttggtgctcggtccttcggggaccggcaaggaagtggtcgcc
cgcaatatccattatctttcagaacgtcgtgatgggcctttcattccggttaactgtggt
gcgattccgcctgagctgttggaaagtgaactgtttggccatgagaaaggttcctttacc
ggcgcaatcagctcccgtaaagggcgttttgagctggccgaaggtggcaccctgttcctc
gatgagataggggacatgccactgcagatgcaggtcaagttgctgcgggttctacaggaa
agagtgtttgaacgtgtgggtggtaacaaggcgattaacgccgatgtaagggtcgtggcc
gcgactcacagagatctggaaaccatgattgaaaatggtgagttccgtgaagatctctac
tatcgtctcaatgtattccctatcgaaatgcctcctctgtgcgagcgccgggatgatatc
ccgctgctgttgcaggagttagtcagtagggtattcaacgaaggcaaggggcgagtgcgc
tttacccagcgcgccatcgactcgctcaaggagcacgcttggtccggcaatgtccgcgaa
ttatccaatttggttgaacgcttgactatcctctatccgggtggtctggtcgatgtcaac
gacctgccggtcaagtatcggcatatcgatgtgcccgaatattcagttgaagtcagcgaa
gaacaactggagcgtgatgccttggcatctatcttcaatgacgaagagccggtcgatctg
cctgaaactcgtttccccagtgaactgcctccggaaggggtcaatctcaaggatctgttg
gccgagttggaaatcgatatgatccgccaagcgctggatcaacaggacaatgtcgttgcc
cgcgccgctgaaatgttgggtattcgccgcaccaccttggtggagaaaatgcgcaaatac
ggcatgagtaaagactaa
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