Shewanella carassii: TUM17387_15570
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Entry
TUM17387_15570 CDS
T07543
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
scaa
Shewanella carassii
Pathway
scaa00020
Citrate cycle (TCA cycle)
scaa00190
Oxidative phosphorylation
scaa00650
Butanoate metabolism
scaa00720
Other carbon fixation pathways
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01120
Microbial metabolism in diverse environments
scaa01200
Carbon metabolism
Module
scaa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scaa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scaa_M00149
Succinate dehydrogenase, prokaryotes
scaa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TUM17387_15570 (sdhA)
00650 Butanoate metabolism
TUM17387_15570 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
TUM17387_15570 (sdhA)
00720 Other carbon fixation pathways
TUM17387_15570 (sdhA)
Enzymes [BR:
scaa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
TUM17387_15570 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
FAD_binding_3
Thi4
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BCV66198
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All DBs
Position
1728474..1730240
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AA seq
588 aa
AA seq
DB search
MAIPVREFDAVVIGAGGAGMRAALQISQEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDNWEHHMYDTVKGSDFIGDQDAIEYMCQTGPEAVIELEQMGLPFSRFENGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKNKTQVFSEWYALDLVKNEDGAIVGC
TAIEIETGEIVYFKAKATVLATGGAGRIFASTTNAHINTGDGVGMAARAGVQLQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGCEGPMGPHLKLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVIPTCHYMMGGL
PTKVSGQVIHKNADGTEEDIKGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETAAPKAATEADIQKSLERLNRWESNKDGEDPAVIRKDLQMCMQLNFSVFRSGDAM
AEGLKELQKIRERLANAKLSDNSREFNTQRIECLELDNLMATAIASAYAANFRTESRGAH
SREDFPERDDANWLCHSLFDPVSETMSTREVNMAPKTREAFPPKKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtggctattccagtacgcgagtttgatgctgtcgtgattggtgccggtggtgccggcatg
cgcgcagcactgcagatttctcaagaaggcaagagctgtgcgctcttgtccaaggttttt
cctacacgttctcacacggtttcggcccagggtgggatcacagttgctctgggtaatgcc
cacgaggacaactgggaacaccatatgtacgatacggtaaaaggttccgacttcatcggc
gaccaggatgccatcgagtacatgtgtcagaccggacccgaagcggttatcgagttggag
cagatgggactgccattctcacgcttcgaaaacggtactatttatcagcgcccattcggc
ggtcaatccaagaatttcggtggtgagcaggccgctcgtaccgctgctgcggctgaccgt
accggccacgcgctgctgcactgcttgtaccagcagaacgtcaagaataagactcaggta
ttctccgagtggtatgccctggatctggttaaaaacgaagacggtgccatcgtaggttgt
actgcaatcgaaattgaaaccggcgaaattgtttacttcaaagccaaggccacggtattg
gctaccggcggtgccggtcgcatctttgcttctaccaccaatgcccacatcaacacaggt
gatggcgttggtatggctgcccgtgctggggttcagctgcaagacatggaaatgtggcag
ttccacccaaccggtatcgccggtgccggtgttctggtaactgaaggttgtcgtggtgag
ggcggttacctgctcaataaagatggcgagcgctttatggagcgctatgcgcccaacgcc
aaagacctggcttcacgcgacgtggttgcccgctccatgatgacagagattcgtgaaggc
cgcggttgtgaaggtcctatgggcccacacctgaagctgaagctggaccatctgggcaaa
gaaaccttggaagcgcgtctacctggtgtatgtgagctgtcccgtacctttgctcatata
gatcccgccgatggcccaattccggttatcccaacctgtcactatatgatgggtggtttg
ccaactaaggtatccggtcaggtgatccacaagaacgccgatgggactgaagaagatatc
aagggcctgttcgccgtgggcgaaatcgcctgcgtatctgttcacggtgccaaccgtctg
ggtggtaactcactgctcgacttggtggtgttcggtcgtgcagccggtcaacacctgggt
aaagcgctagatgaaaccgctgcacccaaggcagcgacggaagccgacattcagaagtct
ctcgagcgcctgaatcgctgggaaagcaacaaagacggcgaagacccggcggttatccgt
aaagatctgcagatgtgcatgcagctgaacttctcggtattccgcagtggtgacgccatg
gccgaaggcctgaaagaactgcagaaaatccgtgagcgtctggccaatgccaagctgtct
gataactccagagagttcaatactcagcgtatcgagtgtctggaactggataacctgatg
gcaacggcaatcgcttcagcttatgccgccaacttccgtaccgagagccgtggtgctcac
agccgtgaagacttccctgagcgtgatgacgccaactggctatgccacagcctgtttgac
cctgtcagcgaaaccatgtccacccgtgaagtgaacatggcgcccaagacacgtgaagcc
tttccgccgaagaagcgtacctactaa
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