Shewanella carassii: TUM17387_15880
Help
Entry
TUM17387_15880 CDS
T07543
Symbol
hupB
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaa03032
]
TUM17387_15880 (hupB)
03036 Chromosome and associated proteins [BR:
scaa03036
]
TUM17387_15880 (hupB)
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_15880 (hupB)
DNA replication proteins [BR:
scaa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TUM17387_15880 (hupB)
Chromosome and associated proteins [BR:
scaa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TUM17387_15880 (hupB)
DNA repair and recombination proteins [BR:
scaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TUM17387_15880 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
BCV66229
LinkDB
All DBs
Position
1762000..1762305
Genome browser
AA seq
101 aa
AA seq
DB search
MRRENYIQGDDMNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKEGDKISLVGFGT
FEVRERAERTGRNPQTGKEIKIAAAKIPAFKAGKALKDAVN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcgcgaaaattacattcaaggggatgacatgaacaaatctgaactaatcgagaaa
attgcttctggtgctgatatttctaaagccgctgccggccgtgcattggattctttcatc
gcagctgtgactgaaggtctgaaagaaggtgacaaaatttctcttgttggtttcggtact
tttgaagtgcgtgagcgcgctgagcgtactggtcgtaacccacagaccggtaaagagatc
aaaatcgctgcagctaagatccctgcattcaaagcaggtaaagctctgaaagacgctgtt
aactaa
DBGET
integrated database retrieval system
