Shewanella carassii: TUM17387_16860
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Entry
TUM17387_16860 CDS
T07543
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_16860 (truA)
Enzymes [BR:
scaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TUM17387_16860 (truA)
Transfer RNA biogenesis [BR:
scaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TUM17387_16860 (truA)
Prokaryotic type
TUM17387_16860 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BCV66327
LinkDB
All DBs
Position
1869162..1869947
Genome browser
AA seq
261 aa
AA seq
DB search
MRIALGIEYDGSGYYGWQRQAEVDSVQGQLERALSQVANEPIALQCAGRTDAGVHATGQV
VHFDTSAIRNEGAWTLGVNANLPDNIAVRWAKEVDDSFHARFSATARRYRYIIYNHNFRP
GILRGGVSHYHGDLDEQKMHQAAQYLLGERDFTSFRAIQCQSRTPFRNVHRVSVTRQGMY
VIVDIEANAFLHHMVRNIVGSLLEVGLGNQPLDWLGQLLELKDRTQAAPTAKPNGLYLVH
VSYPEQYQLPKLAMGPLFMPD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattgcgttgggtatcgaatatgatggtagcggctattacggttggcagcgccag
gccgaagtggattcagttcaggggcagttggagcgggccttgtcccaagtggccaatgag
ccgatagcactgcaatgcgccggtcgcaccgatgccggggtacacgccaccgggcaagtg
gtgcattttgatacttctgcgattcgtaacgaaggcgcctggaccctgggcgtcaatgcc
aatctgccggacaatatcgcggtgcgctgggccaaagaggtggatgacagttttcatgcc
cgcttttcggcaactgctcgccgctaccggtatatcatctacaaccataatttccgtccc
ggcattttgcgtggtggcgtcagccattatcacggcgacctcgacgagcagaagatgcat
caggcggcccagtatctgctgggtgagcgcgacttcaccagtttcagggcgatccaatgc
cagtcgcgcaccccgtttcgcaatgtgcacagggtcagtgtgacccgccagggcatgtat
gtgatagtggatatcgaagccaatgcctttttgcatcacatggtgcgcaacatagtcggc
tcgctgctggaagtaggacttggcaatcagccgctggattggctgggtcagttgctggag
ctcaaagacagaacccaggctgcccccacggctaaacctaatggcctctatctggtgcat
gtcagctatcctgagcaatatcaactgcccaagttggccatgggcccactgtttatgccg
gactga
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