Shewanella carassii: TUM17387_16930
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Entry
TUM17387_16930 CDS
T07543
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
scaa
Shewanella carassii
Pathway
scaa00230
Purine metabolism
scaa00240
Pyrimidine metabolism
scaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
TUM17387_16930 (cpdB)
00240 Pyrimidine metabolism
TUM17387_16930 (cpdB)
Enzymes [BR:
scaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
TUM17387_16930 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
TUM17387_16930 (cpdB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
DUF7436
Motif
Other DBs
NCBI-ProteinID:
BCV66334
LinkDB
All DBs
Position
complement(1875819..1877870)
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AA seq
683 aa
AA seq
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MQTKTLITLAITAALGLSACNSDDKDEPTVSVDLRVLETTDLHTNIMDYNYYSGKEDPTI
GLARTASLIHAARKEVTNTVLVDNGDLLQGSPMGDYMAKVGIADGEVHPAYKAMNLLDYA
VGNIGNHEFNYGLDFLEKSLAGAQFPYVNANVYCDADDCWNGVKKGDNLFTPYLIKETEV
KDTDGNSHKLKIGYIGFVPPQIMLWDKQNLTGKVRAESIVESAKKFVPQMKAEGADIIIA
IPHSGIGSTENPGDPAAENATYALTYVDGIDAIMFGHSHSIFPDARYGDLPNTDVEKGLL
NGVPAVMPGRWGDNMGLVDFKLQRKDGKWTVLSARTEARPIYDGANKTPLVEADKDIHDA
VELEHQGTIAFVEQPIGVAAADMFSFLTLVQDDPTVQIVSDAQITNVKAKLPEALKSLPV
LSAAAPFKAGGRHSTTSDADQYVMVDKGPLTFKNAADLYLYPNTMVAVKLNGAELKDWLE
CSANQFNQIDPASTEPQELVNYNHPTYNFDVIDGVTYKIDVTQPSKFDRDCALVNADASR
IVDLAFTDSEGTVYTGETLAAKEFIVASNNYRAFGGKFAGTGSEHVVLELPDTNREALAA
YITEQSKYNPETDKYDAMVNPTADYNWDFRNIDTNVALDIRFVTQDSDKAANFIQANQQR
TMTKLSTDELGFAVYRIDLKPAQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaagacattaatcacactggcgattaccgccgcactgggactcagtgcctgt
aacagcgacgacaaggatgaaccaacggtgagcgtagatctgcgggtattggaaaccaca
gatctgcataccaacatcatggattacaactattacagcggcaaggaagaccccactata
ggtctggcccgtaccgccagcctgatccacgccgcccgcaaagaagtcaccaacactgta
ttggtcgataacggcgatctgctgcagggcagccccatgggcgactatatggccaaagtg
ggcatcgccgatggcgaagtgcaccccgcctacaaggcgatgaacctgcttgattatgcc
gtgggtaacataggcaaccacgaattcaactacggcctggattttctggaaaaatccctc
gccggcgcccagttcccctatgtcaacgccaacgtctattgtgatgccgatgattgctgg
aacggggtcaaaaaaggtgacaacctgtttaccccttacctcatcaaggaaaccgaggtt
aaggacactgacggcaacagccacaagctcaagattggttatataggttttgtgcctccg
caaattatgctgtgggacaagcagaacctcaccggcaaggtacgtgccgagagcatagtg
gagagcgccaagaaatttgtgccgcaaatgaaggctgaaggcgccgatatcattatcgcc
attccgcactcaggcattggctccaccgaaaacccaggcgatcctgctgccgaaaacgcc
acctatgccctcacctatgtcgacggtattgatgccatcatgttcggccacagccactcc
atcttccccgatgcccgctatggcgacttgcccaacacagatgtggaaaaaggcctgctt
aacggtgtccccgccgtgatgccgggtcgctggggcgacaacatgggcctggtcgacttc
aaactgcaacgtaaagacggcaagtggactgtgctctcggcccgcactgaggcccgccct
atctatgacggtgccaacaagacaccactggtggaagccgataaggacatccacgatgcg
gttgagctcgaacaccagggaaccatcgcctttgtcgagcagccaattggggtagccgcc
gccgacatgttcagtttcctgacgctggtgcaggacgacccgacggtgcagattgtctcc
gacgcccagataaccaacgtcaaggccaaactgccggaagcactcaagtcattgccggtg
ctctctgcagccgcgccgttcaaggccggtggccgtcacagtaccaccagtgatgccgat
cagtatgtgatggtggacaaagggccgctgaccttcaagaacgccgccgatctctacctc
taccccaacactatggtggcggttaagctaaacggcgctgagctgaaagactggctcgag
tgttcggccaaccagttcaaccaaatagatccagccagcactgagccgcaagagctggtg
aactataaccaccccacctataactttgatgttatcgatggcgtgacctacaagatagac
gtgactcaaccgagcaaattcgatcgggattgtgctctggtcaatgccgatgcctcgcga
attgtggatctggccttcaccgacagcgaaggcactgtctatacaggtgaaaccctggcg
gccaaggagtttatcgtcgcctccaacaactaccgcgcctttggcggaaagtttgccggc
accggcagcgagcacgtggtactggaactgccggacaccaaccgtgaagctctggcggct
tatattacagagcaatccaagtacaatcctgaaaccgacaagtatgacgccatggttaac
cccacggccgactataactgggacttcaggaatatagatacgaatgttgctctggacatc
cgctttgtcacccaggacagtgacaaggccgccaacttcatccaggccaaccagcaaagg
accatgaccaagctgagtaccgatgaactgggctttgccgtctaccgcatagatctcaag
cctgcccaataa
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