Shewanella carassii: TUM17387_17270
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Entry
TUM17387_17270 CDS
T07543
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scaa
Shewanella carassii
Pathway
scaa03030
DNA replication
scaa03430
Mismatch repair
scaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM17387_17270
03430 Mismatch repair
TUM17387_17270
03440 Homologous recombination
TUM17387_17270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaa03032
]
TUM17387_17270
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_17270
Enzymes [BR:
scaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM17387_17270
DNA replication proteins [BR:
scaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TUM17387_17270
DNA repair and recombination proteins [BR:
scaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TUM17387_17270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BCV66368
LinkDB
All DBs
Position
1917682..1918353
Genome browser
AA seq
223 aa
AA seq
DB search
MPLLHRTRLAWHCWQAREPLKSFYQALSPVLSKPVAEAPLMALDLEMTGLEPGCDQILSI
GVVPINKGRLELSGARHKLVSIDGSVGQSATIHGIMDRHLEQGALAPEQLLPWLLRQSQG
RILLMHHAPLDCAFLSRLCLQAYGTKLHLPVIDTLLLEKTRLQRQQEVLPSGSLRLGASR
SRYHLPPYSAHNALTDALACGELFLAQSCDAAKEPVADFLSWV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgctgcatagaacccgcctggcctggcattgttggcaggcaagagagccactc
aaatctttttaccaggccttgagtcctgtgttatccaaacctgtggcagaggcgcctttg
atggcgctggacttggaaatgaccggcctagagccgggttgcgatcagatcctctccatc
ggtgtggtgcccatcaacaaaggcagactggagctcagcggcgcgcgccacaaattggtg
agtattgatggcagtgtcggtcagagcgccacgattcacggcattatggatcgccatctt
gaacagggggcgctggcgcccgaacagctcttgccttggctgttacggcaaagtcagggg
cgcattttactgatgcatcatgctcctttggactgcgcttttctcagccgactttgtctg
caggcatatggtactaagttgcaccttcccgtgatagataccctgctgctggaaaagacc
cgcctacagcggcaacaggaggtgctgccaagcggtagtctgcgcctcggcgctagccgc
agccgctatcatctgccgccgtattcggcccacaatgccctgactgatgcgctggcctgt
ggtgagctgtttctggcgcaaagctgtgatgccgccaaagagcctgtggccgatttcctc
tcctgggtatag
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