Shewanella carassii: TUM17387_17330
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Entry
TUM17387_17330 CDS
T07543
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
TUM17387_17330
Enzymes [BR:
scaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TUM17387_17330
Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TUM17387_17330
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Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
BCV66374
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Position
1922220..1923431
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AA seq
403 aa
AA seq
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MFRVLSWFPLLLATQTLAAPQNEDPVEALIKAGEAAFPQCIVELQDKALNEGISQQTIDS
HLKPLKFVPRVIELDRSQPEFTQTFANYFDKRVTDWRVSKGRELLVEHKALLDKLKREYG
VPPQYLLSFWGMETNFGGYKGKMPVLDSLATLACDSRRSGFFTQELMTALKLSQKYGFAA
ADMQGSWAGAMGHTQFMPSAYASYAVDGDGDGKADLWNSIDDALTSAANFLAHLGWQRNE
RWGREVRLPESFDYQYLGQKKSLADWQALGLTQSNGQVLPQAQMEATLYLPAGHEGPAFL
GYDNFQVIQRWNRSEFYAISVGHLADRISGAGRLAKAPPQQTRLSRAQIKALQQKLNEQG
FDAGKPDGILGRNSRASLQAFQLSKGLVADGFPSAETFKALGL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgttcagagtattatcctggtttcccctgctgctggccacgcaaacgctggcagccccc
cagaatgaggatcctgtagaagccctgataaaagccggggaagcggcttttcctcagtgt
attgtggagttgcaggacaaggcccttaacgagggcatcagtcaacagaccatcgactca
catcttaagccactcaagtttgtccccagagtgatagagctggatcgcagtcagcccgag
tttacccagacatttgccaactatttcgataagcgggtaacagattggcgggtttccaag
ggccgggaattgctggttgagcacaaggcgctgctggataagctcaagcgcgagtatggc
gtgccgccgcaatatctcttgtctttctggggcatggagaccaatttcggaggctacaag
ggtaagatgccggtcctggactcgctggcaaccctggcctgtgactcccgccgctcgggt
ttctttacccaggagttgatgacagcgctgaagctgagccagaaatatggttttgctgcg
gccgatatgcaaggctcctgggccggtgccatgggacacacccagtttatgcccagtgcc
tacgccagttatgccgtcgatggtgacggtgacggcaaggcggatctctggaacagcata
gacgatgccctgacctcggcggcaaactttcttgctcacctggggtggcagcgcaacgaa
cgctggggcagggaggttcgcttacctgaatcatttgattatcagtatctggggcagaaa
aagtctctcgccgactggcaggcgctgggattgacccagagcaatggccaggtgctgcca
caggcccagatggaagccacactctatctgcccgccgggcacgagggccctgcgtttctc
ggctacgataacttccaggtgatccagcgttggaaccgttctgagttttatgccatctca
gtaggccatttggccgacagaataagtggcgccggacggcttgccaaagcaccgccgcag
caaacccgcttgagccgcgcccagataaaggcgctgcagcaaaagctcaatgagcagggg
tttgatgccggaaagccggacggtattctcgggcgtaactcccgcgccagtttacaggcg
tttcagctcagcaaaggcttggtagccgacggcttcccctctgccgaaacctttaaagcc
ctgggactctag
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