Shewanella carassii: TUM17387_18040
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Entry
TUM17387_18040 CDS
T07543
Name
(GenBank) RND transporter
KO
K07003
uncharacterized protein
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
TUM17387_18040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMPL
ACR_tran
Patched
Coatomer_E
Motif
Other DBs
NCBI-ProteinID:
BCV66445
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Position
2010286..2012595
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AA seq
769 aa
AA seq
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MLDRLVNGIESFLFRNRIGVILLFALTTVFLGFQASQLKMDAAFVKNIPLHHPYMQTYLK
HQKQFGGANSIMVAVEDSSGNIFNPAFFDTLKNVHDQLFFIPGVERSQVKSLFSPSTRFT
EVVEDGFAGGPVIPADFSTTEAGLERVRGNIEKAGIVGRLVAEDYSAAMVTAQLMDFDPQ
TGEPLDTLAFAAQLEEQLRGQFEKDGIKIHIIGFAKMAGDVADGAKGVLLFFLIAILVTA
LMVYLFSRSMVLTLLPLVCSLIAVVWQLGLLTVVGFGLDPMSILVPFLVFAIGVSHGVQM
INAIRKRVADGLSTKVAAASAFRSLLVPGGVALLSDTIGFMTLLAIDIGIIRELAISASL
GVAVIILTNLILLPLVISFFQIKAAKADAGTEAKTAAFWQKLTCFATPKYAVVVVAVTAL
LYLGGLQQAGKMQIGDLQGGAPALHQDSRYNQDTFFITDHFSITTDVMSVIVEAYPEACT
YHSALEKIDRFEWLARNTPGVEFTASIASVARQVNAGFNEGSPKWQVLPRSPASLAQLVS
QIPTSTGLLNGDCSVMPVYLFLKDHKAETIEQVVSKVKLLAAEMDDDKLSFKLASGPVGV
MAATNEAVAEAQLPMMLYVYGAVFILCLISFRSLKATIAVILPLYVVSTLAQALMTWLDI
GLTVSTLPVIALGVGIGVDYGIYILSTMAVKLRDGMAVQQAYFEALMERGSAVIFTGLTL
AIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAALFWRKHS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgttagacagactggtcaatgggattgagagttttctctttcgcaatcgtatcggagtg
atactgctgtttgcgctgaccacggtatttctgggctttcaggccagtcagctgaaaatg
gatgcggcatttgtcaaaaacattccgctgcatcatccctatatgcagacctacctcaaa
caccagaagcagtttggaggcgccaactccatcatggtggcggtagaagacagcagcggt
aatattttcaatcccgcgtttttcgacaccctgaagaatgtacatgatcaactgttcttc
attcccggggtagaacgctcccaggtgaaatccctgttttcgccgtcgacacgttttact
gaagtggtggaagacggctttgccggggggccggtgatcccggcggatttcagtaccaca
gaagccgggcttgaacgggttagaggcaatatcgaaaaagccggcatagtcggccgtttg
gtggctgaggattacagcgccgccatggtgacggcgcagctgatggactttgatccgcaa
accggcgagccactggacactttggcgtttgccgcgcaactggaagagcagctcagaggt
cagtttgaaaaagatggtatcaaaattcacatcataggctttgccaagatggccggtgat
gtggctgacggggccaaaggagtgttgttgtttttcctgatagccattttggtcacggcc
ctgatggtatatctcttctcccgctccatggtgttgaccctgctgcctttggtgtgcagc
ttgattgccgtggtctggcagcttgggctcttgaccgtggtgggctttggcttggatccc
atgtcgattctggtgccgtttttggtatttgccataggggtcagccacggggtacagatg
atcaatgccatccgcaagcgggttgccgatggcctgagtaccaaggtggcggcggcttcg
gcatttcgtagcctcttggtgccgggcggggtcgccttgttgtcggataccatagggttt
atgaccttgctggcaatcgatatcggcattattcgcgagttggcgatttcggcatcgctt
ggggtagcagtgattatcctgaccaacctgatactcttgcctctggtgatctccttcttc
cagataaaggccgcgaaagcggatgctggcaccgaggccaagacagcggccttttggcaa
aagctcacctgttttgccaccccaaaatatgctgtggtggtagtggctgtgacggcgctg
ctttatctgggcgggctgcagcaagccggcaagatgcaaatcggcgatcttcagggcgga
gcaccggcgctgcatcaggactctcgctataaccaggacactttctttattactgatcat
ttctctatcaccactgacgtgatgagcgtgatagtggaagcttatcccgaggcctgcacc
tatcactcggcgctggagaagattgacaggttcgaatggttggcacgcaacaccccaggg
gttgagtttactgccagtattgcctcggtggcacgccaggtgaatgccggtttcaacgag
ggtagccccaagtggcaggtattgcccaggagcccggcgagcctagcccagctggtgtca
caaattcctaccagtaccggcctgctgaacggcgattgctctgtgatgcctgtttatctg
tttcttaaggatcacaaggcggaaaccatagagcaggtggtgagtaaggtaaagctgctg
gccgccgaaatggacgacgacaagctgagctttaaactcgcttccggccctgtgggggtg
atggcggcaaccaacgaggcggtggccgaggcgcaactgcctatgatgctgtatgtctat
ggcgccgtgtttatcctctgtctgataagcttccgctcgctgaaagccacgattgcagtc
attctgcctctgtatgtggtatcgacactggcgcaggcactgatgacctggctggatatc
ggcctgacggtgagcaccttgccggttatagccctcggggtgggtatcggggtggactat
ggcatctatatcctgtcgaccatggcggtgaaattgcgtgatggtatggcggtgcagcaa
gcctatttcgaagccttgatggagcgaggcagtgcggtcatcttcaccggtctgaccttg
gccattggggtgagtacttggttcttctctgcacttaagttccagatggatatgggaatt
ttgcttaccttcatgtttgtggtcaacatgctaggtgccataattatcctgcctgcgctg
gcggcacttttctggcgcaaacacagctag
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