Shewanella carassii: TUM17387_18690
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Entry
TUM17387_18690 CDS
T07543
Symbol
hexR
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scaa03000
]
TUM17387_18690 (hexR)
Transcription factors [BR:
scaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
TUM17387_18690 (hexR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_24
HTH_29
MarR
Penicillinase_R
HTH_Crp_2
DUF3640
Motif
Other DBs
NCBI-ProteinID:
BCV66510
LinkDB
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Position
complement(2085659..2086513)
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AA seq
284 aa
AA seq
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MNTLEKVQKNLPHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVSRHVEEDDTPESYTTKIFESSMASLDTARQSIDTAAINK
AVDILTQAKKISFFGLGASASVAHDAQNKFFRFNVPVLCFDDVLMQRMSCINSDEGDVVV
LISHTGRTKSLIDIARLARENGAAVIGITARHSPLSQECTLPVTMEVPEDTDMYLPMASR
LAQLVIIDVLATGFTLRRGPRFRESLKRVKEVLKESRIEKNEPL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctcgaaaaggttcaaaaaaacctaccccacttcagcaagtcggaacgcaaa
gtagccgaagttatcctggcatccccccaaaccgctatccattcaagcatagcaactctg
gccaaaatggcggatgtcagcgagcctacagtcaaccgtttctgtcgtcgtttggatacc
aaagggttcccggattttaaattacatctggcccaaagtcttgctaatggtaccccttac
gtcagtcgtcacgttgaggaagatgatactcccgagtcatacactaccaagatcttcgaa
tcttccatggcatctttggacaccgcgcgccagagcatagataccgcggccatcaacaag
gcggtagacatactgacccaagcgaagaaaatctctttctttggtctgggcgcctcggcc
tctgtggcacacgatgcccaaaataagttcttccgtttcaatgttccggtgctgtgtttc
gatgatgtattgatgcaacgcatgagctgtatcaacagcgatgaaggcgatgtagtagta
ctaatttcccacacaggcagaaccaaatcgttgatcgatatagcaagattggccagagaa
aacggcgcagccgtaattggtattactgcgcgtcactcaccgctgtcgcaggaatgtacc
ctaccggtgaccatggaagtgccagaggacactgatatgtacctgccaatggcctctcgt
ttagctcagttggtgattattgatgtactggcgaccgggtttaccctacgccgtggccct
cgcttcagagaaagtctcaagcgggtcaaggaagttttgaaagaatcccgcatcgaaaag
aacgaaccactttaa
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