Shewanella carassii: TUM17387_18980
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Entry
TUM17387_18980 CDS
T07543
Symbol
yqfA
Name
(GenBank) channel protein hemolysin III family subfamily YqfA
KO
K11068
hemolysin III
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
scaa02042
]
TUM17387_18980 (yqfA)
Bacterial toxins [BR:
scaa02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Other
TUM17387_18980 (yqfA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HlyIII
Motif
Other DBs
NCBI-ProteinID:
BCV66539
LinkDB
All DBs
Position
complement(2121037..2121717)
Genome browser
AA seq
226 aa
AA seq
DB search
MPNSKTPAAETHFNGQFSAGYSLNEEIANAVSHGLGVIAGILGLVLMLLKGWHSLNAIQL
TGVTIYGSSIILLFLCSTLYHSIPQPMWKRRLKMLDHCAIYLLIAGTYTPLMLITLADAQ
EEWVLIAIWLLALGGIVFKSCFIHRFKALSLVLYLAMGWLCVAVLPELIDNLSTAGFNLL
LAGGLSYSLGVIFYATKAIPFNHAIWHLFVLGGAVCHFLCVYLTVI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacagcaaaaccccagcagccgaaacccatttcaatggccagttttccgctgga
tacagtctgaatgaagagatagccaatgccgtcagccatggtttgggggtgattgccggc
attctgggattggtgctgatgttgctcaagggctggcattcgctgaatgccattcagtta
acaggtgtaaccatctatggcagcagtattatcctgctgtttctctgctcgaccctgtat
cacagcattcctcagccaatgtggaaacggcgcctcaagatgctggatcactgcgccatc
tatctgttaatcgccggaacctataccccactgatgttaattactttggccgatgcccag
gaagaatgggtgctgatagccatctggttattggcactggggggaatagtgttcaagagc
tgctttattcacagattcaaggcgctgagcttggtgctatatctggccatgggctggctc
tgcgtcgccgtgttgcctgagcttatcgataacttgtcaactgctgggttcaacttgctg
ttggccggggggctgagctacagcttgggggtgatcttctacgccaccaaggcgatccct
tttaatcatgccatctggcatctgtttgtattgggcggcgccgtttgccatttcctgtgt
gtttatctgacggtgatctaa
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