Shewanella carassii: TUM17387_19010
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Entry
TUM17387_19010 CDS
T07543
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
scaa
Shewanella carassii
Pathway
scaa00730
Thiamine metabolism
scaa01100
Metabolic pathways
scaa01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
TUM17387_19010 (thiC)
Enzymes [BR:
scaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
TUM17387_19010 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BCV66542
LinkDB
All DBs
Position
2123698..2125788
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AA seq
696 aa
AA seq
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MSNRQSNRRQTREAAQAFIDNLKPLLHPNSQKLFVQGSRADIQVAMRQIRQTDTRIPTQD
GSAQFEPNPAVRVYDCAGPYSDPNAAINVRQGLDKLRQGWILERDDTQELTSVSSSFTQQ
RLADEGLDHLRFDALPKPRRAKPGKRVTQLHYARAGIITPEMEYIAIRENMARANEALAK
DPQLARKAKGEAFGAIVATPITPEFVRSEVARGRAIIPANINHPEAEPMIIGRNFLVKVN
ANIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIY
QALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRVTGMVSRGGS
IMAKWCLSHHKENFLYSHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLG
ELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLEYCDEAPFYTLGPQTTDIAPGYDHFT
SGIGAAMIAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQLRD
NALSKARFEFRWEDQYNLGLDPDTARAFHDESLPQESAKVAHFCSMCGPKFCSMKITQDV
RDYAASLAASQVASGDSSGPDAAERQTEPVQAEELTAQPLEVLDAEAGMARMSAQFKAAG
SALYQPATVGEKSESNPNPKPKSKSKPEATRYEEEA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgtcaatccaatcgtcgtcaaacccgtgaggccgcccaggcctttatcgat
aaccttaaacccttgttgcatcccaattcacagaagctgtttgttcagggttcccgggcc
gatattcaggttgccatgcgccaaatcaggcagacagacacccgaataccaacccaagat
ggcagcgcgcaatttgaacccaatcccgctgtacgtgtttatgattgtgccggcccttac
tcagatcccaacgcggctatcaatgtgcgccagggcctggataaactgcgccagggctgg
atcttagagcgtgatgatacgcaagagctgacttcggtcagctccagttttacccagcag
cggctggcggatgaagggctggatcatttgagattcgacgctttgcccaaaccgcgccgg
gccaagccgggtaagcgggtgacccaattgcattacgcccgcgccggcattatcactcct
gaaatggaatatatcgccattcgtgaaaatatggcccgggccaacgaagcgcttgccaaa
gatccgcagctggcccgcaaggccaaaggagaagcctttggcgctatagttgccacgccg
ataacccctgagttcgttcgcagcgaagtggcccgtggccgcgctatcattcccgccaac
attaatcacccggaagctgagcctatgatcatcggccgcaactttttggtgaaggttaac
gccaatatcggtaattcggcggtgacctcttccatcgaggaagaggtggaaaaactggtg
tgggccacccgttggggcgccgatacggtaatggatctgtccaccggccgttatatccac
gaaacccgcgaatggatagtgcgcaactcgccggtgcccataggtaccgtgcccatctat
caggcgctggaaaaggtcaacggcattgccgaagacctcagttgggaagtgtttcgcgac
accctgatagagcaggccgaacaaggggtggattacttcaccattcatgccggggtcttg
ctacgctatgtgcccatgacggccaatcgggtgaccggcatggtatcccgtggcggctcc
attatggccaagtggtgcctgagccatcataaggaaaacttcctctacagccatttccgc
gatatctgtgagctttgcgccgcctatgatgtttctctgtcgctcggtgacggcatgcgc
cccggctcgattgccgatgccaacgacgaggctcagtttgccgagctggaaaccttgggt
gagctggtgaaaatcgcatgggaatacgatgtgcagaccattatcgaagggccgggccat
attccgatgcagctgatcaaggaaaatatggataaacagcttgagtactgtgatgaggcg
cctttctacaccttggggccccagaccacggatattgcgcccggctatgatcatttcacc
tctggcataggcgcggcgatgattgcctggtacggctgtgccatgctctgttatgtgacc
cccaaggagcatctggggttgcctaacaaggaagacgttaaacaagggcttattgcatac
aaaattgcggcgcatgccgccgatgtcgccaaaggacatccaggtgcccagctgcgcgac
aatgcgttgtcaaaggccagattcgagtttcgctgggaagatcaatacaacctggggttg
gatcccgataccgcccgggcgttccacgatgaatccctgcctcaggagtctgccaaggtg
gcgcatttttgctccatgtgcggccccaagttctgttcgatgaaaatcacccaggatgta
cgcgactatgcagcgtctttggctgcgtctcaggtggcttcgggggattcgtcagggcca
gacgcggcagagcgccaaaccgagcctgtgcaggcagaagaattgacggcacagccgctg
gaagtactggatgccgaggcagggatggcgcggatgtcggcgcagttcaaggccgctggc
agcgccctgtatcaaccggcaacagtaggcgaaaagtccgagtccaatcccaacccaaag
cctaagtccaagtccaagccagaggctacacgctatgaagaggaagcctga
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