Shewanella carassii: TUM17387_19080
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Entry
TUM17387_19080 CDS
T07543
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
scaa
Shewanella carassii
Pathway
scaa00550
Peptidoglycan biosynthesis
scaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TUM17387_19080 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scaa01002
]
TUM17387_19080 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
TUM17387_19080 (dacB)
Enzymes [BR:
scaa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TUM17387_19080 (dacB)
Peptidases and inhibitors [BR:
scaa01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
TUM17387_19080 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
TUM17387_19080 (dacB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Amelotin
Motif
Other DBs
NCBI-ProteinID:
BCV66549
LinkDB
All DBs
Position
complement(2132318..2133856)
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AA seq
512 aa
AA seq
DB search
MPQLSLQYLARPLLLLSAMALSSPLKADNTSLDDLLALITPASSQTAVWIEDLQSGELLL
SHNSETLMIPASTQKLLTAVTATEMLGEEFRYHTSILSTGSPKNGVLQGDLYLLFSGDPT
LKRQDLIELFKRVTEAGINQVQGNLILIGETHEQLRAPGWVWDDLGICYAAPVSSYVINQ
NCVHGKLEPTLASDKAKISAPVYLPVKLTTNAIFDKGHKQGFCELQLARLPGNHFHFSGC
FPGAQVLPLALAVNDPGQYAIDTVAGIIKGKLSIKGKILTSNQLPASSRVVASHASDTLP
ELLETMLLESDNLIADSLLKQLGKHYYGDGASFSAGAKAIREVLAEKGIVLERAQLIDGS
GLSRYNLLNARQLAQLLRLIADTPDYQWLMHKLPISGHSGTLKYRKHYANKPLKGRVWAK
TGSMQGVVNLAGYVTDDSDKQVPRYLFVILENGLSPQSKELEAAPFATLLLQGLTDYRAN
SHTEGQLAAKEQDKPKPTQQEKTQTEVNVSAR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccacagctgtccctgcagtacttggcacgtccactgttattattgagcgccatggcg
ctgtcttcccctttgaaggccgataatacctctcttgatgatcttttggctctgatcact
ccggcctcatcacaaaccgccgtctggatagaagatctgcaaagcggcgagctactgctg
agccacaacagcgaaaccctgatgatcccggccagtacccaaaagctgctaaccgcggta
acagccaccgaaatgctgggagaagagtttcgttatcacaccagcattctcagcacaggt
tcgcccaaaaatggcgtacttcaaggcgatctctatctgctgtttagtggcgatcccacc
ttaaagcgccaggatttaatagagctgttcaagcgtgtcaccgaagcgggtatcaaccag
gtacagggcaaccttatcttgataggtgaaacccatgagcagcttagagcacccggttgg
gtatgggatgacttggggatctgttacgcagcccccgtctccagctatgtgattaaccaa
aactgtgttcatggcaaactcgagcctacactcgcctcggacaaggccaaaatttccgcg
ccggtttatctgccggtcaagctaaccaccaacgccatcttcgataagggccacaagcag
ggcttttgcgaactgcaactcgctagattacccgggaaccactttcatttcagtggctgt
ttcccaggcgctcaggtattaccgctggcgctggcggtcaacgatcccggccaatatgcc
atcgacactgtcgctggcatcatcaagggcaagctcagtataaaaggcaagatactcacc
tccaatcagctaccggccagctcaagggtggtggccagtcatgcctcggataccctgccc
gagcttttggaaaccatgctgctggaatctgacaacctgattgccgacagcctgcttaaa
cagctggggaaacactattatggtgatggcgccagtttcagtgccggcgccaaggccatc
agggaagtgctggcggaaaaaggcatagtgttggaaagagctcaactgatagacggttca
ggcctatcacgttacaacctactcaatgcccggcagttggcgcagttgctgcgtctgatt
gccgataccccagattaccaatggttgatgcacaaactgccgatatccggccacagcggc
accttgaagtaccgtaagcattatgccaacaaaccgctcaagggcagagtctgggccaaa
acaggcagcatgcagggtgtggtgaatctggccggttatgttaccgatgacagtgacaag
caagtgcccagatacctgtttgtaatactggaaaatggtttgagcccccagagtaaggaa
cttgaagccgcaccctttgccacgcttttgctgcaggggctgacagattaccgtgcaaac
agccacacagaaggccaactggcggcaaaagagcaagataagcccaaaccaacacagcag
gaaaaaacgcagacagaagttaatgtcagcgcccgttag
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