Shewanella carassii: TUM17387_19470
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Entry
TUM17387_19470 CDS
T07543
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaa03032
]
TUM17387_19470 (gyrA)
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_19470 (gyrA)
Enzymes [BR:
scaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TUM17387_19470 (gyrA)
DNA replication proteins [BR:
scaa03032
]
Prokaryotic type
DNA Topoisomerases
TUM17387_19470 (gyrA)
DNA repair and recombination proteins [BR:
scaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TUM17387_19470 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BCV66588
LinkDB
All DBs
Position
2176519..2179158
Genome browser
AA seq
879 aa
AA seq
DB search
MTDLALSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDAAAAM
RYTEIRMEKLAHQLLADLEKETVDYVPNYDGTEMIPAVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVKGCLALIEEPELSIEQLMDYIPGPDFPTAAIINGKKGIEEAYRTGRGKA
IMRARAEVETEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVVEVKRGEVAEVVLNNLYAQTQMQTSFGINMVALTNGQPKLFNLKEMLEAFILHRREV
VTRRTVFELRKARERAHILEALAIALANIDPVIALIKASPTPAEAKVKLVETGWQLGNVQ
GMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHEKILQEYEEL
LELIAGLLHILRSPERLMEVIKEELAEVLEQYGDERRTEINASAVDISLEDLICEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKLYW
LKVYQLPLASRQSRGKPIVNLLPLSEGEHITAILPVREYEADKYVIMATSHGTVKKTSLI
EYSRPRANGIIAVNLKDGDQLIGVDLTDGSNEIMLFSNEGKVVRFSEDQVRAMGRTATGV
RGIKLEDGQEVVSLIVPKEDGAILTVTENGFGKRTELSEYPTKSRATKGVVSIKVSERNG
AVVGAVQVGDNDEIMLISDKGTLVRTPAAGVSIIGRNTQGVTIIRTAGDEAVVGLQRIDE
IQSDEDEVEFDENGEPIVAEAAAEDTEGQAPEAPEAEQE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggctttatcaatttcgccaataaatattgaagacgaactaaagaactcc
tatctggattacgccatgagcgttatcgtcgggcgggcattgccagacgtacgcgatggc
ctcaagccggtacatcgccgcgtactctttgcgatgaacgagctgaaaaacgattggaac
aaaccctataagaagtcggcacgtgttgtcggtgacgtgataggtaagtatcaccctcat
ggtgacagcgccgtgtacgacactatagtgcgtatggcacagcctttctcgctgcgttac
accctggtggatggccaaggtaacttcggctctatcgatggcgatgccgcggcggccatg
cgttataccgaaattcgtatggaaaagctggcgcatcaactgctggctgaccttgagaaa
gaaaccgtcgattatgtccccaactacgacggcaccgaaatgatcccggccgtgttgccg
acccggatccccaacctgctggtcaacggttcttccggtattgcggtgggtatggccacc
aatattccgccgcacaacctgaccgaagtggttaaaggctgtttggcacttatcgaagag
cctgagctgtctatcgaacagctgatggattatatcccgggcccggatttcccgactgcc
gccattatcaatggcaagaaaggcatagaggaagcgtaccgtaccggtcgcggcaaggcg
attatgcgcgcccgtgccgaggtggaaaccgaagacaatggccgcgagcggatcattgtt
acagagatcccataccaggtgaacaaggctcgtctgattgaaaagattgccgagctggta
aaagacaagaaaattgaaggcatcagcggcctgcgcgatgagtctgataaagacggtatg
cgcattgtggttgaggttaagcgcggcgaagtggccgaggtggtgctcaacaacctctat
gcccagacccagatgcaaacctcttttggtatcaacatggtggccctgaccaatggtcag
cctaagttgtttaaccttaaagagatgctggaagcctttattctgcaccgccgtgaagtg
gtgacccgcagaaccgtgtttgaactgcgtaaagcccgcgaacgcgcgcatattctggaa
gccctggctatcgccctggccaacatcgaccctgtgattgcgctgatcaaggcctctcca
acacccgcagaagccaaggttaaactggtggaaaccggttggcagctcggcaacgtgcag
ggcatgttggaaaaagccggtgatgacgccgcccgccctgaatggttggagccggagttt
ggtattcgcgatggtctctactatctgactgagcagcaagcccaggctatcctcgagctg
cgtctgcaccgtctgaccggtcttgagcacgagaagatcctccaggaatatgaagaactg
ctggagctgattgctggattgctgcatatcctcagaagcccagagcgtctgatggaagtg
atcaaagaagagttggcagaagtactcgagcaatatggtgacgagcgtcgcaccgagatc
aatgcttcagccgtggatatcagcctcgaagaccttatttgcgaagaagatgtggtagta
accctgtcgcacttgggttatgccaagtatcagcctctgagcgattaccaagcgcagcgc
cgcggcggtaagggcaaagcggctaccaaggtcaaagacgaagatttcgttgagaaactg
ttggttgccaatacccacgacaccattttgtgcttctccgacttcggcaagctctactgg
ctcaaggtttatcagttgccgctggccagccgtcagtcgcgcggtaaacctattgtgaac
ctgctgccattgtctgagggcgagcacattacggcgattctgccggttcgtgaatacgaa
gccgacaagtatgtcatcatggcgacttcccacggtacagtgaagaagacatcgcttatc
gagtacagccgcccaagagccaacggtattatcgccgttaacctgaaagacggtgaccag
ttgatcggcgttgacctgaccgacggcagcaatgaaatcatgctgttctccaacgaaggt
aaggtggtacgctttagcgaagatcaggtgcgcgccatgggccgtaccgctaccggtgtt
cgtggtatcaaactcgaagacggtcaggaagtggtttcactgatagtgccaaaagaagat
ggcgccattctgacagtcacagaaaacggttttggtaagcgtaccgaactgagtgaatac
ccaaccaagagccgtgctaccaagggcgtggtttccatcaaggtcagcgagcgtaacggc
gccgtagtcggtgcggttcaggttggcgacaatgatgagatcatgctgatcagcgacaag
ggcacactggtgagaactccagcggccggcgtttccatcataggccgtaatacccagggc
gtgaccattatccgcaccgccggtgacgaggccgtggtgggtttacagcgtatcgatgaa
atccagtctgatgaagacgaagtggaattcgatgaaaacggcgaacccatagtggccgaa
gctgcagctgaggatactgaaggccaagcgcccgaagcacctgaagccgagcaggaataa
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