Shewanella carassii: TUM17387_19520
Help
Entry
TUM17387_19520 CDS
T07543
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
scaa
Shewanella carassii
Pathway
scaa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
TUM17387_19520 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
scaa03011
]
TUM17387_19520 (rpsA)
Ribosome [BR:
scaa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
TUM17387_19520 (rpsA)
Bacteria
TUM17387_19520 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
OB_RRP5_4th
TOBE
Motif
Other DBs
NCBI-ProteinID:
BCV66593
LinkDB
All DBs
Position
2184264..2185958
Genome browser
AA seq
564 aa
AA seq
DB search
MVYYLKLINMTESFADLFEQSLQQLEFRPGSIVRGTVVAIENGMVLVDAGLKSESPIPAE
QFKNAQGELEIAVGDQVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGV
INGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTAHLENKELEFKVIKLDQKRNNVVVSRR
AVIESESSAERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP
SEIVNVGDEINVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTRLTGRVTNLTDYG
CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKT
NPWEDFANRYAKGDKVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGSGEDAVGEYKK
GDEITAVVLSVDPERERISLGVKQTEDDPFNAYLADKKKGTIVVGTVTAVDAKGVTVELA
DTVEGYIRVSDISRDRVEDASSVYNVGDSVEAKFMGVDRKNRAISLSVRAKDEAEEKEVM
ANLNKQDDAIMTNAMAEAFKAARK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggtttattacttaaagttaattaacatgactgaatcttttgctgatctgtttgaacaa
tcccttcaacaactggaattccgcccaggttctatcgttcgtggtactgtagttgccatc
gaaaacggtatggtactggttgacgccggtctgaaatctgagagcccaatcccagctgag
caattcaaaaacgctcaaggtgaactggaaatcgccgttggcgaccaagttgacgttgcg
ctggatagcgttgaagacggtttcggtgagactcaactgtctcgcgagaaggccaagcgc
cacgaagcctggatcgttctggaaaaagcttacgaagatgctgaaactgtaatcggtgtc
atcaatggcaaggttaaaggcggtttcaccgttgagctgaacggtatccgtgcgttcctg
cctggttctctggttgacgttcgcccagtacgcgatactgctcacctggaaaacaaagaa
ctggaattcaaagttatcaagctggaccagaagcgcaacaacgttgttgtttctcgtcgt
gctgttatcgaatctgaaagcagcgctgagcgtgatgctctgctggaaaacctgcaagaa
ggtcaagcagttaaaggtatcgttaagaacctgaccgactacggtgcattcgtagatctg
ggcggtgttgacggcctgctgcacatcaccgatatggcttggaagcgtgttaagcaccca
tctgagatcgtaaatgttggtgacgaaatcaacgtcaaagtactgaagtacgatcgcgag
cgcactcgtgtatctctgggtctgaagcaactgggtgaagacccatggctggaaatcagc
aagcgctacccagaaaacactcgtctgactggtcgcgtaaccaacctgactgactacggc
tgcttcgttgaaatcgaagaaggcgttgaaggtctggtacacgtttctgaaatggattgg
accaacaagaacatccacccatccaaggttgttaacctgggtgacgaagttgaagttctg
gttctggacatcgatgaagagcgtcgtcgtatttctctgggtctcaagcagtgcaagacc
aacccatgggaagacttcgctaaccgttacgccaagggcgacaaagttaccggtaagatc
aagtctatcactgacttcggtatcttcatcggtctggacggcggtatcgacggtctggtt
cacctgtctgacatctcttggaacggtagcggcgaagatgctgttggcgagtacaagaaa
ggcgacgaaatcactgcagtggttctgtctgttgatccagagcgtgagcgtatcagcctg
ggtgttaagcagactgaagacgatccattcaacgcctacctggccgacaagaagaaaggt
acaatcgtagttggtactgttactgctgttgacgccaaaggtgtgactgttgagctggct
gacactgttgaaggttacatccgtgtatctgacatcagccgtgaccgtgttgaagatgca
tcaagcgtctacaatgtaggtgacagcgttgaagccaagttcatgggcgtagatcgcaag
aaccgtgcaatcagcctgtctgtacgtgctaaagacgaagctgaagaaaaagaagtgatg
gctaacctgaacaagcaggacgacgctatcatgactaatgcaatggctgaagcgtttaag
gcagctcgtaagtaa
DBGET
integrated database retrieval system
