Shewanella carassii: TUM17387_19620
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Entry
TUM17387_19620 CDS
T07543
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_19620
01504 Antimicrobial resistance genes [BR:
scaa01504
]
TUM17387_19620
Transporters [BR:
scaa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TUM17387_19620
Antimicrobial resistance genes [BR:
scaa01504
]
Gene variants
Tetracycline resistance genes
Transporters
TUM17387_19620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
DcuC
CcmD
DWORF
Motif
Other DBs
NCBI-ProteinID:
BCV66603
LinkDB
All DBs
Position
2193968..2195350
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AA seq
460 aa
AA seq
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MSEPTALSLVPPIVVLVLAIWLRRPILALIIGAVSGLLLLDPSQVLNNFADISLKVMADE
TIGWLILVCGSFGALIALLVRTGGALAFGRKALKLAKGPRSSLLMTFVLGLVIFIDDYLN
ALTVGETMKRVTDRFKISREMLAYVVDSTAAPVCVLVPLSTWAVFFGGLLVNNGVAAEGE
GIQIYMQAIPYMFYAWLAVAMVLLVILGIVPAIGPMKKAQLAAAAGSPAKEQTDFDEVQT
SDEYAVRAMEEEFEQADKQGQLHNFLVPILLLVGFTVYFDIDVWKGLLATLVITLPYYAV
QRLMPLSEMMDQMIDGFKSMLPAIGTVIAAFVFKDVCDQLLLPQYVIESLSPFMTPKLLP
AVVFVAMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIPLVIGALLSASSFGSQACFYS
DSTVLAAQGSGCNLVSHAVTQLPYALIAAVLTFIGFIIVA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccgacagcgttaagtcttgttcccccgattgtcgtattggtgctggccatt
tggttgcgtcgtcccatcctggccttaatcataggtgccgtcagtggtctgttgcttctg
gaccccagtcaggtactgaataacttcgccgatatctcactcaaagtgatggccgatgag
accataggatggttaatcctggtatgtggcagtttcggtgccctgatagccttgttggtg
cgcacaggtggcgccttggcctttggccgtaaagcgctcaaacttgccaaagggccacgc
tcatctctgctgatgacctttgtgctcggcctggtgatctttattgatgattacctgaat
gcactcacggtcggcgaaaccatgaagcgggtcaccgacaggttcaagatctcccgtgag
atgcttgcctatgtggtcgactccaccgcagcacctgtgtgcgtcttggtaccgttatct
acctgggcggtgttctttggcgggctattggttaacaacggtgtggccgcagaaggcgag
gggatccaaatctatatgcaagcgatcccttatatgttttacgcctggttggcggttgcc
atggtgctgctggtcatccttggcatagtaccggccatagggccgatgaaaaaggcgcag
ctcgcggcggcggccggcagtccggccaaagagcagacagattttgacgaggttcagacc
tcggatgaatatgccgtacgtgccatggaggaggagttcgagcaggcggataagcaagga
caattgcacaatttcctggtacccattttgctgttggttggttttaccgtctacttcgat
atcgatgtctggaaaggcttgttggcaaccttggtgattactttgccatattacgcggtg
caacgtttgatgcccttatccgagatgatggatcagatgatagatggcttcaaaagcatg
ttgccggccataggcacagttatcgccgcctttgttttcaaagatgtttgcgaccaactg
ttgctgcctcagtatgtgattgagtccctgagtccctttatgacgcctaaactcttgcct
gcagtggtgtttgtggccatggcaattctggccttcgctaccgggtccagttggggaatt
tttgcggtgaccattcctattgtgatgccgctggctcaatctgtgggggccgacattcct
ctggtgataggtgccttgttgtcggcttcatcctttggtagccaggcttgcttctactca
gactccaccgttctggcggcgcaaggatcgggctgtaatctggtaagccatgcggtgaca
cagttaccctatgccttgatagcggcagtacttacctttattggcttcatcatagttgca
tga
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