Shewanella carassii: TUM17387_19840
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Entry
TUM17387_19840 CDS
T07543
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine biosynthesis protein TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_19840 (ttcA)
Transfer RNA biogenesis [BR:
scaa03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
TUM17387_19840 (ttcA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
KH_PARP14_8
Motif
Other DBs
NCBI-ProteinID:
BCV66625
LinkDB
All DBs
Position
complement(2217142..2218104)
Genome browser
AA seq
320 aa
AA seq
DB search
MSEVMQELDKKQITRLNKLQKRLRREVGSAIADYNMIEEGDRVMCCLSGGKDSYAMLDIL
LNLQQRAPVQFEIVAVNLDQKQPGFPEEVLPAYLDSLGVAYHILEKDTYSIVKDKIPEGK
TTCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPPKLLSDD
GANMVIRPLAYCREKDIAEYAKLKAFPIIPCNLCGSQENLKRAEVKNMLKLWDKQFPGRI
ETIFTAMQNTAPSQGVDRTVFDFMALERNPDAPASGEVAEADLPAFDFMDVSNSGHIDLD
SAAKHADQSQRIEVVGIYQP
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagttatgcaagagctggataagaaacaaatcactcgtctcaacaaactgcaa
aagcgtttacgccgcgaagtcggcagcgccattgccgattacaacatgattgaagaaggc
gatcgcgtgatgtgctgcctctccggtggcaaagacagctatgccatgctggacattttg
ttgaacctacaacagcgggcgcctgtgcagtttgaaattgtcgccgtcaacctggatcag
aagcagcccggattcccggaagaagtactgccagcctatctggatagtttaggcgtggcc
taccatattcttgaaaaagacacctattcgatagttaaagataagatccccgaaggcaag
accacttgctcactttgttctaggctgcgccgcggtaccctttatgggtttgcccagcga
ataggtgccaccaagatagcgctcggccaccacagagacgacatcatagaaaccctgttc
ctcaacatgttctacggtggcaagatgaaggccatgccacccaagttgctatcggatgac
ggtgccaatatggtgatccgtcccctcgcctattgccgagaaaaagacattgccgaatac
gctaaactgaaagccttccctatcattccttgtaacctttgcggctcccaggaaaacctc
aagcgcgccgaggtcaagaatatgctcaaactgtgggacaaacagttccccggccgtatc
gaaaccatctttactgcgatgcaaaataccgcaccgtcccaaggcgttgaccgcactgtg
tttgactttatggcactggagcgcaatccggatgctcccgccagcggtgaagttgccgaa
gccgatttacccgcctttgactttatggatgtcagcaacagcggtcatatcgatctcgac
agtgccgccaaacatgcagatcaaagccagcgtatcgaagtggttggcatctatcagcct
tga
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