Shewanella carassii: TUM17387_20750
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Entry
TUM17387_20750 CDS
T07543
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
scaa
Shewanella carassii
Pathway
scaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TUM17387_20750 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scaa01007
]
TUM17387_20750 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_20750 (aspS)
03029 Mitochondrial biogenesis [BR:
scaa03029
]
TUM17387_20750 (aspS)
Enzymes [BR:
scaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
TUM17387_20750 (aspS)
Amino acid related enzymes [BR:
scaa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
TUM17387_20750 (aspS)
Transfer RNA biogenesis [BR:
scaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TUM17387_20750 (aspS)
Prokaryotic type
Other AARSs
TUM17387_20750 (aspS)
Mitochondrial biogenesis [BR:
scaa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
TUM17387_20750 (aspS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCV66716
LinkDB
All DBs
Position
complement(2323432..2325213)
Genome browser
AA seq
593 aa
AA seq
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MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFDVA
STLRNEFCVQVKGVVRARPDSQVNAHMRTGEIEVLGKELTIINAADPLPLSMDNFQNNSE
EQRLKYRYLDLRRPEMAQRLIFRAKVTSAVRRFMDSNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MSSEQVMQKTEEMVRGLFLELLNVDLGEFPTMTYAEAMRRFGSDKPDLRNPLELVDVADL
VKDVEFAVFNGPANDVEGRVAVIRVPGGAELSRKQIDDYTKYVGIYGARGLAWMKVNDLA
AGMEGIQSPVLKFLNEDIVKALLERTGAQSGDIILFGADKANVVAEAMGALRLKLGEDFN
LLQGDWAPLWVVDFPMFEKADGRLYAVHHPFTAPRGVTPAELEANPAETVSDAYDMVLNG
TELGGGSVRIHNQEMQATVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRLVM
LMTGASSIRDVMAFPKTTTAACPLTNAPGEANPQQLVELGIKVAEKAADKAEV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggggacgtaaacaagtcccacgttggacaagaagtgaccctg
gtgggttgggtgaaccgtagccgcgacttgggtggtgtggtgtttttggatctccgggat
cgtgaaggactgatccaggtagtatatgacccggacttgcctgaggttttcgatgtcgcc
agcacactgcgcaacgaattctgtgtccaggtgaaaggtgtggtcagagcccgtcccgac
agccaggtcaacgctcatatgcgtaccggcgaaatcgaggtgctgggtaaggaactgacc
ataatcaacgccgctgaccctctgccgctgagtatggataacttccagaacaacagcgaa
gagcagcgtctcaagtatcgctatctggacctgcgtcgtccggaaatggcccagcgactg
attttccgtgccaaggtcaccagtgccgtgcgtcgttttatggacagcaatggttttttg
gatatcgaaacccccattctgaccaaggccacgccggaaggcgcccgtgactatctggtg
ccaagccgcacttacaaggggcagtttttcgccttgcctcagtcgcctcagctgttcaaa
cagctgttgatgatgtcaggtttcgaccgttactaccaaatcgtcaagtgcttccgcgat
gaagacttgcgcgccgaccgtcagcctgaatttacccagattgatatcgaaacctctttc
atgagctctgagcaggtgatgcaaaagaccgaggagatggtgcgcggtctgttcctcgaa
ctgctcaacgtggacctgggtgaattcccgaccatgacctatgccgaagccatgcgccgt
ttcggttccgacaagccggatctgcgtaacccgctggaactggtggacgtggccgatctg
gtcaaggatgttgagtttgcggtattcaacggcccggccaacgatgttgaaggccgtgtg
gcggttatccgggtgcctggtggtgccgagctgtcccgtaagcagatagacgactacacc
aagtatgtcggtatctatggcgcccgcggtctggcctggatgaaggtcaacgatctggct
gccggcatggaaggcattcagtcacctgtgctcaagttcctcaatgaagatatcgtcaag
gcgctgctggaacgcaccggcgcgcaaagcggcgatatcattctgtttggtgctgacaag
gccaacgtggttgccgaagccatgggcgcgctgcgtctgaagctgggtgaagatttcaac
ctgctccagggcgattgggcaccgctgtgggtggtggacttccctatgttcgagaaggcc
gatggtcgcctgtacgcagtgcaccatccgtttaccgcgccgcggggcgtgactccggcc
gagctggaagccaacccggccgagacggtatccgacgcttatgatatggtacttaacggt
accgaactcggtggcggctctgtacgtatccataatcaggagatgcaggccacagtattc
cgtattctcgggatcacagatgaagaagccaaagaaaaattcggcttcctgctggaagcg
ctgcgctacggcacaccaccgcacgctggtttggccttcggtctcgaccgtctggtaatg
ctgatgacaggcgccagctcgattcgtgacgtgatggcgttcccgaaaaccactaccgca
gcctgcccgctgacgaatgcaccgggtgaggccaatccacaacaactggtggaattgggt
atcaaggttgctgaaaaggcggccgacaaagctgaagtctga
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