Shewanella carassii: TUM17387_20870
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Entry
TUM17387_20870 CDS
T07543
Symbol
fumB
Name
(GenBank) fumarate hydratase class I
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
scaa
Shewanella carassii
Pathway
scaa00020
Citrate cycle (TCA cycle)
scaa00620
Pyruvate metabolism
scaa00720
Other carbon fixation pathways
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01120
Microbial metabolism in diverse environments
scaa01200
Carbon metabolism
Module
scaa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scaa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scaa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TUM17387_20870 (fumB)
00620 Pyruvate metabolism
TUM17387_20870 (fumB)
09102 Energy metabolism
00720 Other carbon fixation pathways
TUM17387_20870 (fumB)
Enzymes [BR:
scaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
TUM17387_20870 (fumB)
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
BCV66728
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All DBs
Position
complement(2341935..2343452)
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AA seq
505 aa
AA seq
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MSVIKQADFIDSITDALQYISYYHPKDFIDAMAAAYEREQSQAAKDAIAQILINSRMSAE
GHRPLCQDTGIVTCYVYLGMGVQWDKTDMTVQQMVDEGVRRAYTNPDNPLRASIVADPAG
SRKNTRDNTPSVVHIQMVPGDHIEVAIAAKGGGSENKAKMVMLNPSDDIAAWVEKTLPTM
GAGWCPPGMLGIGIGGTAEKAAVLAKEALMESVDIHELMERGAETTEEKLRLDIFERANN
LGIGAQGLGGLTTVLDVKIKTAPTHAASKPVVMIPNCAATRHVHFHLDGSGPAELTPPSL
DDWPEITWEVGESVRRVNLDTVTQEEIESWNSGDTLLLSGKMLTGRDAAHKRIQSLIESG
EGLPEGVDFTGKFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTDLMLDKTGLMGMIGKAE
RGPATVESIRKHKAVYLMAVGGAAYLVSKAIKQSRVVAFEDLGMEAIYEFDVKDMPVTVA
VDSNGVNAHETGPAIWKVNIQNAKA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaatcaagcaagctgactttatcgacagcatcactgatgccctgcaatatatc
tcctattaccatccgaaagattttatcgatgccatggctgccgcctatgagcgtgagcag
agccaggctgccaaggatgcgattgcccagattttgattaactcgcgtatgtctgccgaa
gggcacagacccttgtgtcaggataccggcattgtgacctgttatgtctatctggggatg
ggtgtgcagtgggacaagacagatatgacagtgcagcagatggtggatgaaggtgtgcgc
cgcgcttacaccaatcctgataacccgctgcgggcctcaattgtggccgacccggccggc
agccgtaaaaacacccgcgataacacaccttctgtggtgcatattcagatggttcccggc
gatcatatcgaagtggccattgccgccaaaggcggtggcagtgaaaacaaggccaagatg
gtgatgctcaatccgtctgacgatatcgccgcttgggtggagaagacactgccaaccatg
ggcgctggctggtgtcctccgggtatgctgggaataggtattggcggcaccgccgagaaa
gccgccgtgcttgccaaggaagccttgatggagagcgtggatattcatgaactgatggaa
cgcggcgccgaaactacggaagagaagctgcgtttggatatcttcgagcgcgccaataac
ttaggcattggtgcccagggcctgggcggtttgactactgtactggacgttaaaatcaag
acagcgccaacccacgcagcctccaagcctgtggtgatgatccctaactgcgccgccacc
cgccatgtgcatttccatcttgacggcagcggcccagccgagctgactccgccaagcctt
gatgactggccggaaatcacctgggaagtgggtgagagcgtgcgccgggtcaatctcgat
actgttacccaggaagagattgaaagctggaacagcggcgatactctgctgctctcgggt
aagatgctcacaggtcgtgacgcggctcacaaacggatccagagcctgatcgaaagtggt
gaaggcttgcctgaaggggttgatttcactggtaaattcatctattacgtaggtccagtc
gatccagttggtgatgaagtggttggcccggccggtccgacaaccgctacccgtatggat
aagttcaccgatcttatgctggataagacagggttgatgggcatgataggcaaggccgaa
cgtggtccggccacagttgaatctatccgcaagcacaaggcggtatacttgatggccgtc
ggcggcgccgcttatctggtgtccaaggcgattaagcaatcccgtgtggtggcgtttgaa
gatctcgggatggaagccatctatgagtttgacgtcaaggatatgcctgttactgtagcg
gttgactccaacggggtgaatgcccatgaaaccggcccggcaatctggaaggtgaatatc
cagaacgccaaggcttaa
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