Shewanella carassii: TUM17387_21330
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Entry
TUM17387_21330 CDS
T07543
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scaa
Shewanella carassii
Pathway
scaa03030
DNA replication
scaa03430
Mismatch repair
scaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM17387_21330 (dnaQ)
03430 Mismatch repair
TUM17387_21330 (dnaQ)
03440 Homologous recombination
TUM17387_21330 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaa03032
]
TUM17387_21330 (dnaQ)
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_21330 (dnaQ)
Enzymes [BR:
scaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM17387_21330 (dnaQ)
DNA replication proteins [BR:
scaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TUM17387_21330 (dnaQ)
DNA repair and recombination proteins [BR:
scaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TUM17387_21330 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BCV66774
LinkDB
All DBs
Position
complement(2392520..2393266)
Genome browser
AA seq
248 aa
AA seq
DB search
MNIISNASRQIILDTETTGMNQGAGPVYQGHRIIEIGCVEVINRRLTGRTFHQYINPGQP
IDEEAIAVHGITNERVANEPRFQEIAADFIAFIQGAEIVAHNASFDVSFMDHEFSMTNPR
GPVTADICQILDSLAIAKFLHPGQKNNLDALCKRYHIDNSRREYHGALLDAEILADVYLA
MTGGQTKFNLSSDQAGQEAGGIVRLDANRAKLKVITASADELNKHEQRLDLVAKSGKCLW
REEPQLLD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatatcgaatgccagtcggcagatcattctggataccgaaaccacaggtatg
aaccagggcgcaggccccgtctatcaaggccacaggatcattgagatcggttgcgtggaa
gtcattaaccgccgcctgaccggccgcactttccaccaatacatcaatccgggccagccc
attgatgaagaggcgatcgcggttcacggtattaccaatgagagggtggccaacgagccc
aggttccaagagattgccgccgattttatcgcctttattcaaggggcggagattgtggct
cacaacgcctcgtttgacgtgagctttatggatcatgagttttccatgaccaatccccgg
ggaccggtgacggcggatatttgtcagatcctcgactccctggccatcgccaagtttttg
cacccggggcaaaagaacaatctggacgccctgtgtaaacgctaccatatagacaactcc
cgtcgtgagtatcacggcgctttgctcgatgccgagatcctcgccgatgtatatctggcg
atgacaggtggtcaaaccaagttcaacctctccagcgatcaagccggccaggaagccggc
ggcatcgttcgtctcgatgccaatcgcgcaaaacttaaagtgatcaccgcttcggccgat
gaattgaataagcatgagcaaaggctcgatttagttgcaaaatcaggcaagtgcctctgg
cgtgaagaaccacaacttttggattga
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