Shewanella carassii: TUM17387_21380
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Entry
TUM17387_21380 CDS
T07543
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
TUM17387_21380
Enzymes [BR:
scaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TUM17387_21380
Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TUM17387_21380
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM_OapA
Fur_reg_FbpB
Motif
Other DBs
NCBI-ProteinID:
BCV66779
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Position
2396687..2398219
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AA seq
510 aa
AA seq
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MLAGSLSLLGGCQLLSQAPESTTEAQVKVTPPPAVTRAPQVLREPEVAVTDVWQRIRNQL
NMPIPDEKLVRQYRQWYINNPRHLEQISERAAPFMYLIVEQIEERKLPMELALLPIVESA
FDPFAYSHGAASGLWQFTAPMALHFGLNINWWYDGRRDVPAATTAALSMMEYLYDKTGEN
WLYAIAAYNTGEGRVLNAVKRNRQKGQPTDFWSLSLPKETERYVPQLLALADVVKNADKY
GIKLTPIANEQKLEVVDVGSQIDLALAARLAGMEVNELQQFNPGFNRWATAPDGPHKLVL
PLEKAKEFEIALASTEPSERLNWLRYQIRKGDSLGVIAQKHHTSIDVIRSVNGISGNNIV
AGKHLLIPVALKDASAYPLSKEQRLGQNRSGKSKRSYQVKAGDSLWQIAKDHDVSVNELV
KWNGISAKTPLRPGKQLTIWSRTQGKSQNANAVMRTVKYKVRSGDSLARIASKFSVTVND
LLEWNQLKANKYLQPGQMLTLFVDVTRVKS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgttggcagggagcctttccctgcttggcggctgtcagctgctgtctcaggcgccggag
tccacgaccgaagcacaggtgaaagtcaccccgccaccggccgtcacccgggcgccacaa
gtactcagggagccagaagtggctgtcactgatgtgtggcagcggatccgcaaccagctc
aatatgccaatacccgatgagaaactggtgcgccaataccgccagtggtacatcaataat
ccaaggcacctagagcagatctccgagcgggccgcccctttcatgtatttgattgtcgag
cagatagaagagcgtaaactgccgatggaactggcgctgctgccgatagtagaaagcgcc
ttcgacccttttgcctactcccatggcgccgcctccgggctgtggcagtttaccgcgccc
atggcgctgcattttggcctgaatatcaactggtggtatgacggacgtcgcgacgtgccg
gcggccacaacagccgcgctgagtatgatggaatacctctacgacaagacgggcgaaaac
tggctctatgccattgccgcatataacacgggcgaaggtcgggtgttgaatgcggttaag
cgcaaccgccaaaaggggcagcctaccgacttctggtcgctgtccctgcctaaggaaact
gagcgttatgtaccacagttgctggcactggccgatgtggtcaagaacgccgacaaatat
ggtattaagctcacgccgatcgccaacgagcagaagctggaagtagtcgatgtcggtagt
cagatagacttggccctggcagcccgccttgccggtatggaagtcaatgaactgcagcag
ttcaatccagggttcaatcgctgggccaccgcgccagatggcccacacaagctggtatta
cctttggaaaaggccaaagaatttgagatcgccttggccagcacagagccgagcgagcgc
ctcaactggcttagataccagatccgcaagggtgactccctcggggtgatagcccaaaag
catcataccagcatcgatgtgatccgttctgtcaacggcatcagcggtaacaatattgtc
gccggcaagcacttgttgatcccggtcgccctcaaggacgcctcggcttacccgctctcc
aaagagcagcgtctgggtcagaatagatccggcaagagcaaacgtagctatcaggtcaag
gccggtgactccctgtggcagattgccaaagatcatgatgtcagtgtcaatgaattggtg
aaatggaacgggatctcagccaaaacacctttgcgtccaggcaaacagttgactatctgg
agtcgcacccaaggcaaatcacagaatgccaatgctgtcatgcgcaccgtgaaatacaag
gtgcgctcgggtgactctctggcccgaatagccagtaaattcagtgtcacagtcaatgac
ctgctggaatggaaccaactcaaggccaataaatacttacaacccgggcaaatgttgacc
ctgtttgtagatgtgaccagagtcaaaagctaa
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