Shewanella carassii: TUM17387_21690
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Entry
TUM17387_21690 CDS
T07543
Name
(GenBank) DUF490 domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_21690
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_21690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
PDDEXK_7
Motif
Other DBs
NCBI-ProteinID:
BCV66810
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All DBs
Position
2441263..2445255
Genome browser
AA seq
1330 aa
AA seq
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MSQPPMPQESNPSRKQVAKKTRPLWLKSLRWSTRALLYIPLGLLVLLALLLGTAPGSHLA
VFLTSALVQDLELEYVSGTLNRELQLKQVHWQMDGISVGADALTLAWQPACLLQKQLCVD
ALELTTTRVDIDTQAFASDPAAEEEASSTGELILPFGISLKQANLTDIQVRVDEMHFDAA
ALNTAANWQETGLQVIQLESRGLSVLLPESNSAQTQVADKDEQVATAKQPKAAPKSETDE
WALTQMPNVAMPFPIYLKHAELKDSRLQILGRDDRFEELRLSANYLGAELRVNELYAKHT
DASLSLEGELTLDKHWPMALTVQLELQRLPELPGLEQQLLDLTLKGDFSDLTLKAKLSGE
QSLALNASVNLTKPELPYSVNISEGELHWPFDLAQYSVSRLELESRGDLKQQTANLAAQL
STPFYPELSLNTHLTHRGQRLEVAEFNGDSSAGKVVLKGALDYADGIAWEANLLLSHFNS
GAITLPSTEEATKEKDTNSQVVQNKTNNEATSAQNQTDEDKSEISLAEDTPVIPSSDISG
QLATSGHWQDSKWRVSLKQTRLQGLLDRLPFELTGDLEIDDSLQLSSQGLSLRALNTRLD
LSGSAKEQWDLSATLDVPDFNLWHPEAFGALTADIQVVGDAKHPQVQLKAETQSIKFGDL
RLSGSQLKALYAPLDLHEFALSLKTGEFDGAGIHLDGITLRAKGNEQQQKLGLETEGDLQ
LDTAVYSQLDLAKQTARLELSKFNLGSVLGQWQLEQTVSLDWDLKQNRGELSAFCLSHPF
SRLCLVDNVSLTDKGEAKLHYQGQPGQLLAKLLPEQLSWQGDASMDAALAWQPGARPQGK
LDFQLAPGKVSLKRKQQASASVDYQALTLKATLDDDALRSHILFNSDALARWESQLDINI
TPDRSLSGYVNIEKINLQLLGQFMPQLETIEGLLGANLKLAGSLNNPELSGQLSLREGAL
ASTANPTKLEQISLDMAFVGQTAELQGQWMMGSGQANLSGQLRWPQGQFSGDIQLKGQEL
GVIQPPLAIVNVSPDIQLHFSPDALDIKGEVKVPSGNIKVVQLPAGGVSVSSDVVFSDSI
SEQEAKSSPMALSADLNIDVGDKLAIDGMGLKGMLVGTLRMQQSPQKPPQLFGDIKVVNG
SYKFMGQTLKIATGEVQFVGPMQIPNLNIEAIREIRDEDVTAGVRITGNPNKPIVTLFSN
PAKEQAEILSYIVQGKGFGSGNEQNNSLMMGAALSLSSQVDGGAISTLGDTAAGLVEMFG
FSNVQLDTNDDGKVAISGYIGKDLMIKYGVGVFNPGYEMTVRYYLLSQLYLESVSGTLGQ
SLDIYYSFDL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaccccctatgccgcaggaatccaatccaagccgcaagcaggtggcgaaaaaa
acgcgccccctgtggctcaagtcgttgaggtggtctacccgcgctctcttatatattccg
ctcgggttgctggtgctgttggcactcttgctgggcacggcacccggcagccatttggcg
gtgtttctcaccagtgctctggtgcaggatctggagctggaatatgtttccggcaccctg
aaccgggagctgcaactcaaacaggttcattggcagatggacggcatcagtgtcggtgcg
gatgccttgacccttgcctggcaacctgcctgccttttgcaaaaacagttatgcgtcgac
gccctggaattgacaacaactcgggtcgacatagacacccaggccttcgcttcagatccg
gccgcagaggaagaagcatcaagcacgggagagctgatactgccctttggcatcagcctg
aagcaggcaaacctcacagatattcaagtgcgggtcgatgagatgcactttgatgctgcg
gcattgaataccgcagccaactggcaggaaacggggttgcaggtcatccagcttgaaagt
cgcgggctcagcgtgctgctcccagagtcaaattcggcccaaacgcaggtggcagataaa
gacgagcaggtcgcaacggctaagcagccaaaagcagcaccaaagagtgagactgatgaa
tgggcgctgacgcagatgccaaacgttgccatgcccttccccatctatttaaaacatgcc
gagctaaaggactcacgcctgcagattctgggcagggatgacaggtttgaggaactgcgc
ctcagtgccaattatctcggcgccgagctgcgagtcaacgagctttatgccaaacacaca
gatgccagtctgtcgctggaaggtgaactgactctggataagcattggcccatggcactg
acggtacaactggagttacagcgtttacctgaactaccgggactcgagcagcaactgctg
gatctcaccctcaagggagatttcagcgacttaacgctcaaggctaagctcagtggtgag
cagagcctggcgctcaatgccagtgtcaacctcaccaaaccggaactgccctattcagtg
aacatctcagaaggggaactgcactggccctttgatcttgcccagtacagtgtcagcaga
ctagagctggaaagccgcggcgacctcaagcagcaaacggccaacctcgcggcacaatta
agtacccctttctaccctgagctcagcctcaatacccacctgacgcatcgaggccaaagg
ctcgaggttgcagagttcaatggcgacagcagcgccggtaaagtcgtgcttaaaggcgcg
ttggattatgccgatggcatcgcctgggaagccaatcttctgctttcacacttcaatagc
ggcgcgataaccctgccttctaccgaagaagcgaccaaagaaaaagacaccaatagccaa
gtcgtacaaaacaaaactaacaacgaggcaacaagcgcacaaaaccagactgacgaggac
aaatctgaaataagtctggctgaagatacgccggtgatcccgtccagcgatatcagcgga
cagctggctaccagtggtcactggcaggatagcaagtggcgagtgagtctcaaacagacc
cgacttcagggcttattggaccgcctgccctttgaactgactggcgatctggagatagat
gattcgctgcagctcagcagccagggattatcgctgcgggcgctcaatacccgcctggat
ctgtcaggcagcgccaaagagcaatgggatctcagtgccacgctggacgtacccgacttc
aatctctggcatcccgaggctttcggggctttaacagccgatatccaggtggtgggcgat
gccaaacacccacaagtacagcttaaggcggaaacccaaagcatcaaatttggcgatctc
agactcagtggcagccaactcaaggcgctctatgcaccgctggatctgcatgagtttgcc
ctgtcactaaagacgggtgagtttgacggcgcaggcattcatctcgatggcatcactctc
agggccaaaggcaatgaacagcaacagaaactggggctggaaaccgagggcgatctgcag
ctggacaccgccgtctacagccaactggatctcgccaaacaaacggctcgactggaactc
agcaagttcaacttgggatccgttctcgggcagtggcaacttgaacaaaccgtgtctttg
gactgggatctcaagcaaaaccggggcgaactcagcgccttttgtttgagtcacccattc
agcagactctgccttgtcgataatgtcagcctcaccgacaagggtgaagccaagttgcac
tatcagggacaacccgggcaactgctcgccaagctgttacccgagcagctcagctggcag
ggtgatgcctcgatggatgccgccctcgcctggcaacccggcgcacgtccacagggcaag
ctcgacttccagttggctcccgggaaagtgagccttaaacgcaaacaacaagccagcgcc
agtgtcgactatcaggcgctgacactcaaggccaccttggacgatgatgcgttgagaagc
catattctgttcaattccgatgccctcgcccgctgggaaagccaactggatatcaatatc
actccggatcgcagcctcagtggctacgtcaatattgaaaaaatcaatctacaactgctt
ggtcagtttatgccgcagcttgaaaccattgagggcttactcggggccaacttaaagttg
gctggcagcctcaacaaccccgaactcagtggccagctcagtctgcgcgaaggtgctctg
gctagcacagccaacccgactaaactagagcaaatctcattggatatggcttttgtcggc
caaacggccgagctccagggccagtggatgatgggtagcggccaagccaatctcagcggt
cagttgcgctggccacagggacagttcagtggcgatatccagctcaagggccaagagctc
ggcgtcattcagccgccactggcgattgtcaatgtcagcccggatattcaactgcatttc
agcccggacgcgctcgatatcaagggggaggtcaaggtgccttccggcaatatcaaggtg
gtgcaactgcctgccggcggggtaagcgtatcatccgatgtagttttcagcgactcgatt
tctgagcaggaggccaagtcatctcctatggcgttgagtgccgatctgaacatagatgtc
ggtgataagctggctatcgatggcatgggcctcaaagggatgttggtgggaactttacgg
atgcagcaatccccccaaaagccgccgcaactctttggcgatatcaaggtggttaacggc
agttataaattcatgggtcagacactgaaaattgctactggcgaggtacagttcgttggg
cctatgcagatccccaacctcaatatcgaggccatcagggagatccgcgatgaggatgtt
accgccggggtacggatcaccggcaaccccaacaagccgatagtgaccctattctccaat
ccggccaaggagcaggccgagatcctttcttatattgttcagggaaaaggctttggctcg
gggaatgaacagaacaactcactgatgatgggcgcagcgctgtcgttgagctcccaggtc
gatggtggcgccatttccaccttgggcgacaccgcggccggcctagtagagatgtttggc
ttctccaatgtgcagttggataccaatgatgatggtaaagtcgccatcagcggctatata
ggcaaagatctgatgatcaaatatggtgttggtgtattcaatccgggttacgaaatgacg
gtacgctactatctgttgtcgcagctctacctggaaagtgtatccggcactctgggccag
tctctggatatctactacagctttgatctttaa
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