Shewanella carassii: TUM17387_21730
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Entry
TUM17387_21730 CDS
T07543
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scaa01002
]
TUM17387_21730
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
TUM17387_21730
Peptidases and inhibitors [BR:
scaa01002
]
Cysteine peptidases
Family C82
TUM17387_21730
Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TUM17387_21730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BCV66814
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All DBs
Position
complement(2447119..2448573)
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AA seq
484 aa
AA seq
DB search
MTQRALMSLLTILFLSSAAFSVKADDAALRILNDQLQLLALLPEGREFADDLRTIRGGDL
NLQLERRDGIEQGIADFWKRRGVSLAFNQLSNDADPLSRALALEPQQDDYLATSSRIRYL
IWLAERHQWPRLDPGGWLRPGDSHLLIPTIARRLYWLGDLNSEPGDNKVYSPQLASAVEA
FQSRHGLKTDAIIGPDTLRWLNTEPLARARLLASNFVARTVYQQQLGSRYLLVNIPAFEL
TLVDDNQVQLRSRVIVGKPYRQTPLLSSEVSNIVLNPTWTVPRGILRRDLLPQIRKDGEY
LQQRHFNVYDYQGNRVEESAEAWQKEASGRFPYRLVQQPGADNALGRYKFHFSNGFNVYL
HDTPDKHLFAKANRALSSGCIRVDKVEELASWMANNLVRDKRTWQRMQSDYQTTQWFAFE
QRLPVHLVYWTAWMDESEVAQFRSDIYQLSPGVKVAVEARVRQDAELANKSGQRLRSEAH
LLGP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgcgcgttaatgtctctactgaccattctattcctcagtagtgcggcattt
tcagtgaaagccgatgatgccgctctcaggatcctgaatgatcaactgcagttactggca
ctgttgccggaggggcgagaatttgccgatgacttacgcactatacgtggcggtgatctc
aacttgcagctggaacgccgtgatgggattgaacagggcatcgccgacttttggaaacgt
cgtggcgtatccttggcatttaatcaattgtccaacgatgcggaccctctcagtcgggca
ttggcgctggaacctcaacaagatgactatctggcaaccagcagccggatccgctatctg
atttggctcgctgagcggcatcaatggcctaggttggaccccggcggttggctgcgccct
ggcgatagtcatctattgatcccaacgattgccaggcgtttatattggcttggcgatctc
aatagcgagcctggggataacaaggtttattcaccgcagctggcctcggcggtagaagcg
tttcaatcccgtcatgggcttaaaaccgatgccatcattggcccagatacgctgcgctgg
ctcaataccgaaccgttggcgcgagctcgcctgctggccagcaatttcgttgctcgcacc
gtctaccaacagcagttggggtcgcgttacctgttggtgaatatcccggcgtttgaattg
actctggtggatgacaatcaggtacagttgcgctcccgggtcatagtcggtaagccctat
aggcagacgccgctgctcagtagcgaggtatccaatattgttttgaatcctacctggaca
gtgccaaggggaatactgaggcgtgacttactgccgcagatccgcaaggatggcgaatac
ttgcaacagcggcatttcaatgtctatgactatcagggcaatagagtcgaagagagcgcc
gaagcctggcaaaaagaggcgagtggccgttttccttatcgtctagtgcagcaacctggc
gccgataatgccttggggcgctacaagttccatttcagcaatggctttaatgtttatctg
catgacacaccggacaagcatctgtttgccaaggctaatcgtgccttgtcatccggttgt
atccgggtcgacaaggtggaagagttggcgtcctggatggccaataatctggtgcgggac
aagagaacctggcaaaggatgcaaagtgactatcaaaccactcagtggtttgcctttgag
cagcgtctgcctgttcatctggtgtattggaccgcttggatggatgaaagtgaagtggcg
caatttcgcagtgatatctaccagttgagccctggggttaaggtcgctgtcgaggccagg
gtacgacaggatgccgagctagccaataaatcagggcaacgtttgcggagtgaagcgcat
ttgttaggtccttga
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