Shewanella carassii: TUM17387_22170
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Entry
TUM17387_22170 CDS
T07543
Symbol
rlmA
Name
(GenBank) 23S rRNA (guanine(745)-N(1))-methyltransferase
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scaa03009
]
TUM17387_22170 (rlmA)
Enzymes [BR:
scaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
TUM17387_22170 (rlmA)
Ribosome biogenesis [BR:
scaa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TUM17387_22170 (rlmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RlmA
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Ubie_methyltran
Methyltransf_32
MTS
FtsJ
mRNA_G-N7_MeTrfase
MetW
Methyltransf_9
Motif
Other DBs
NCBI-ProteinID:
BCV66858
LinkDB
All DBs
Position
complement(2501023..2501826)
Genome browser
AA seq
267 aa
AA seq
DB search
MTYICPLCRSELVQDGKQWCCSQNHSFDKAKEGYVNLLPVQKKNSRDPGDNKQMMQARRA
FLNAGYYQALSDRVNELALEYCKTQPEILDLGCGEGYYSERLQQAVGGKLYGLDISRTAI
RYAAKAHPQMRFCVASAYDMPFADAAFDLMLRIYAPSKVQELARVCKPGGVFICVSPGPR
HHFQLKEIIYSEPREHELTKAELPGFNLLHDERLQWPLVLPAGPVCNDFLEMTPYVWKLS
AEQKQQLQAEGLRCELDFHIQIYQRNT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacttatatttgtcccctgtgccgcagcgagttggtgcaggatggaaaacaatggtgt
tgtagccaaaaccacagctttgacaaggcaaaggaaggctatgtcaacctgttgccggtg
cagaagaaaaattctcgcgatcccggtgacaacaagcagatgatgcaggccaggcgcgct
tttttgaatgccggctattatcaagctctcagcgacagggtcaacgagctggcgttggaa
tattgtaagacacaacccgagattttggacttgggctgtggtgaaggctactacagcgag
cgtttgcaacaagccgttggtggtaaactctatggtttggatatttccagaaccgcgatt
cgttacgccgccaaggcacatccacagatgcgcttttgtgtagccagcgcctacgacatg
ccttttgccgatgcagcctttgatctcatgttgcgtatctacgcaccatcaaaagttcag
gagttggcacgggtgtgtaagcccggcggcgttttcatctgtgtatccccaggcccaaga
catcactttcagttaaaagagatcatctatagtgagccaagagagcatgagctgaccaag
gcagagctaccgggttttaacctgctgcatgatgagagactgcagtggccgctggttctg
ccggccggaccggtttgcaatgactttctggagatgactccctatgtctggaagctcagc
gccgaacagaaacagcagctgcaggctgagggattgcgttgtgaactggatttccacatt
caaatttaccaacgtaatacataa
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