Shewanella carassii: TUM17387_22520
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Entry
TUM17387_22520 CDS
T07543
Name
(GenBank) marine proteobacterial sortase target protein
KO
K07114
Ca-activated chloride channel homolog
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_22520
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_22520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA
VWA_2
VIT_2
VWA_CoxE
Gram_pos_anchor
DUF2201
YscK
Motif
Other DBs
NCBI-ProteinID:
BCV66893
LinkDB
All DBs
Position
complement(2537139..2539481)
Genome browser
AA seq
780 aa
AA seq
DB search
MNMDIPRQENEQFQRMPAASHSDSDTYLCRAVNALQFSGFALLALLVFNLVSSVEAWAEN
GPQFAEEPASVQAQEGTLQLIDNPQWPGAGVLAFGDTQAPALATEVSMSISGWSNRVSVT
QSFTNDTQKWIHGRYLFPLPNEAAVDSMQLRIGERIIEGVIQPKEEAKRTFEQAKAQGKR
ASLLSQERPNLFTTQVANLAPGETLKVSFSYQQALDYRDGQFSLRFPMTHTPRYLPQSML
QSFKGVEEAARLLSPVIEAAGLEKMFAGTDSESSDLKSSQAQSPHAQSPHAHSGGQENRL
SLDIILDAGFPLLSLESPYHAISQQTLSDGRIRVQLQQDNTKADSDFVLQWQADPGAKSA
AALFSQQGQTHTPAPSLAQAEGQAARDEYSLLMLMPPQSKEVAKPLPRELILVIDTSGSM
GGDAIVQAKQALLYALSSLKPEDSFNVVEFNSAVQTMATNSLPATAHNIGRAQQFIRALE
ANGGTEMSKALELALNNDFAAQNKVGTQGEVKALRQVIFMTDGAVGNEQALFELIKDRLG
DNRLFTVGIGSAPNSHFMQRAAELGRGSFTYIGKMQEVEQKVVALLEKISAPRITDVSLR
YPDGTVPDYWPAQIPDLYQGEPVLVSIKQRSNAQKAVIVSGLIDGQFWQQELALNAKTEP
KGLDLIWARKQIAALELAKGAANSERIERQVTALSLKYHLVSPYTSLVAVDVTPVNPDAA
ATREGQVASHAPKGWQGKLPQTATDSRLMLLLGLASLLAALMLAAFPRAFGGRACEEAGR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggatatccctcggcaggaaaacgagcagtttcagagaatgcccgccgccagt
cacagcgattctgatacttatttatgcagggccgtcaacgccctgcaattttcaggcttt
gccctgctggcactgctggtgttcaatctggtgagctcggttgaagcctgggccgagaat
ggtccccaatttgccgaagagcctgcaagtgtccaggctcaggaaggtacccttcaactg
attgataatccgcaatggccaggtgccggggtgctcgcttttggcgacactcaggcaccg
gcactggcaaccgaagtcagcatgagcatcagtggctggagtaacagagtcagcgtcacc
cagtcattcaccaatgatacccagaagtggatccacggccgttacctgttcccgctgccc
aatgaggcggcggtggacagcatgcagctgagaataggtgagcggatcatcgagggggtt
attcaaccaaaggaagaggccaagcgcacttttgagcaagccaaggctcagggcaagcgc
gccagtttactgagtcaggagcggcccaacctgttcaccactcaggtggctaatttggcc
ccgggggaaacccttaaagtcagcttcagctaccagcaggcattggattaccgtgatggt
cagttcagcctgcgctttcccatgacccacacgccccgttatctgccccaaagcatgctg
caaagcttcaagggtgtggaggaggcggcgcggttgctgagtcctgtgattgaagccgcg
ggccttgaaaagatgtttgccggtacagatagcgaaagctctgatcttaaaagctcccaa
gcgcaaagcccccatgcgcaaagcccccatgcgcacagcggtggccaggagaatcgcctc
agtttggatattatcctggatgccggttttcccttgctgtcgctggaatccccttatcat
gctatttcccaacaaaccctgagtgatggccgtattcgggtgcagctgcaacaagacaat
accaaggccgacagcgactttgtgttgcaatggcaagcggatccgggcgccaagtccgca
gcggcgcttttcagccagcaagggcagacccataccccagcaccttctttagcgcaggcc
gaaggccaagctgccagggatgaatacagtctattgatgttgatgcctccacagagcaaa
gaggtggccaagcccttgcccagggagcttattctggtgatagatacttccggctccatg
gggggagatgcaatagttcaggccaaacaggcactgctgtatgccttgagcagcctcaaa
ccggaggacagtttcaatgttgttgaatttaactctgcagtgcaaaccatggcgaccaac
tctttgcctgcgacggcccacaatataggtcgggcgcagcagtttattcgcgccctggaa
gccaacggtggcaccgagatgtccaaggcgctggagttggcattgaataatgattttgcc
gctcaaaataaagtcggcacgcaaggtgaggttaaggcgctcaggcaagtgattttcatg
acagatggcgccgtaggcaatgaacaggcgctatttgaactgattaaagacaggctcggc
gacaaccgcctgtttaccgtaggcataggcagtgcccccaactcccactttatgcagcgc
gccgccgagctggggcggggcagctttacctatattggcaagatgcaggaggtggagcaa
aaggtggttgccttgctggaaaaaatctccgctcccaggatcacagatgtgtcgctgcgc
taccctgacggcacagtgccggattactggccggcacaaattccggatctctatcagggt
gagccggtattggtgagcatcaaacagcgtagtaatgcccaaaaggcagttatcgtatcc
ggtcttatcgatggccaattctggcagcaggagctggcgctcaatgccaagactgagccc
aaagggctggatcttatctgggccagaaaacagatagccgcgctggagctggccaaaggt
gcagccaacagtgaacgcattgaacgccaggtcacagcgctgtcgcttaagtatcacttg
gtcagtccgtacaccagcctggtggcagtggatgtcaccccggtcaatccggacgctgcg
gcgacccgggaagggcaagtggccagtcatgcgcccaagggctggcagggtaagttgccg
cagaccgccaccgacagccggctgatgttgctgctggggttggcaagtttgctggcggcg
ctgatgctggcggctttccccagggcctttggcggccgtgcttgtgaggaggcggggcga
tga
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