Shewanella carassii: TUM17387_23560
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Entry
TUM17387_23560 CDS
T07543
Symbol
prlS
Name
(GenBank) sensor histidine kinase
Organism
scaa
Shewanella carassii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
Response_reg
HisKA
PAS
PAS_8
V-ATPase_su_f
HATPase_c_2
DUF202
Motif
Other DBs
NCBI-ProteinID:
BCV66997
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Position
complement(2658177..2661605)
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AA seq
1142 aa
AA seq
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MNLTLFVAVIAVCYVCLLFLLAWGAERWFSGVTRRLQKWIYALSLAVYCSSWSFLGTVGQ
SANDFWSYLHIFIGPIIIFTLGFGMLRKMVVVSKAQNITSVADFIAARYGKSQPLAVIIT
LIALFGIMPYIALQLKAMVFSLSLFQSPDDPLDGAKVALIIAVLLAIFAILFGTRKLDAT
EHNPGMMLAIAFESLVKLAAFVLVGGIVVFGVFGGFGDLWSQASAKGVIVNPNLRLEALM
PELIVGMAAFLCMPRQFHVMVVEAEGEQTLSKARWLFPLYIGLFGLFVGPLALAGKVLLG
DSVSADTYVINLPLALDAPWLAIVALLGTLSAATGMVIVAVVTISVMISNEWLVPVLLRT
GQIRRKNFSQFSQQLLYARRLSIALILAFGYFSYLSFESSDSLSNLGMLSFGAFAQLAPA
LVGGLYWKHGNRAGVFLGMAAGFGLWGFLLLKGSGAWEGVLAGQFELLKALKPNVNDTLL
ALGANLIGYIGGSIWLRAGLVERIQASAFVTPGELKNTGNRKTGPISQQDLLILASRFVS
PTRAYESFSRFSADAVRSDSWHKTAPPELIAHTEHMLAGVLGASSASLVMDSVLQGRDLA
LDEVFSLVDEASSKIILSQDMLRAAIEHAYEGMSVVDKDLNLVAWNYRYAELYDYPEDFL
QPGMPISEVIRFNASRGYCGPGDVNEHVERRVQHMRNGTAHSSERRRRDGKVIKIQGNPM
PDGGFVMTFTDITQYREQQQALEQVNETLEARVKERTYELALLNSKLLEAKAQEEMANAS
KSRFLAAVGHDLMQPLNAARLFTASLSQYPGLDREGRLTLSHVNSSLKTAGELLTDLLDI
SKLDSGMVEVKRRDFAISEVLNALAVEFEAMAKDCQIRFAMMPCSLTVNSDPSLLRRVLQ
NFLTNAYRYAKGGRVLMGCRRRGSELEVQVLDTGCGIEAGQLREIFHEFKRLDNPHSNSV
NGLGLGLAIADRISKVLEHDIRVSSVQGKGSVFAIRVPLGATVSVPQPKAISSVLQPLAG
VKVLCIDNEEAILAGLESLLSRWQCEVICARDLSDARIKLGLKGVAPDIMLADYHLDKGQ
NGVDAMDELRALYGQHLPGILITANTRKDLVEDVERRGYHYMAKMIKPAALRALISSLVK
KA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaccctttttgtggcggtgatcgccgtctgttatgtctgtttgctgttcctg
cttgcctggggcgcagagcgttggttcagtggcgtcacccgcaggttacagaaatggatt
tacgccctcagcctggcggtgtattgctcttcctggagttttctcggcacggttggccag
tcggccaatgacttttggtcctatctgcatatctttattggccccatcatcatctttacc
ctgggctttggcatgctgcgcaaaatggtggtggtgtccaaggcgcaaaatatcacctcg
gtggccgactttatcgccgcccgctacggcaagtcgcagccgctggcggtgatcatcacg
ctcattgccctgttcggcatcatgccctatatcgcgctgcagctgaaagccatggtattc
agcctaagcctgttccaaagcccggatgatccgctcgatggcgccaaagtcgcgcttatc
atcgccgtgctgctggccatcttcgccatcctcttcggcacccgcaaactggatgccacc
gagcataacccggggatgatgctggctatcgcctttgaatctttggtgaaactggccgcc
tttgtgttggtgggcggcatagtggtcttcggggtatttggcggctttggcgacctctgg
agccaggccagcgccaagggggtaatagtcaatcccaatctaaggctcgaagcactgatg
cccgagctgatagtcggcatggcggcttttctctgtatgccgcgccagttccacgtcatg
gtggtcgaggccgaaggcgagcagacactgtccaaggcgcgctggttgttccctctttat
attggcctgttcggtttgtttgtcgggccgctggccctggcgggcaaggtgctgctcggc
gacagtgtctctgccgatacctatgtgatcaatctgccgctggcgctggacgcaccttgg
ctggcgatagtggcgctgctgggaaccctctcggccgccaccggcatggtgatagtggct
gtggtgaccatcagcgtgatgataagtaacgagtggctggtgccggtactcttgcgtacc
gggcagatccgtcgcaagaactttagccagttttcccagcaactgctctatgccagacgt
ctctccatcgcgctgatcctggctttcgggtatttcagttacctgagctttgagagcagt
gattctttgtccaacctgggcatgctgtctttcggcgcctttgcccagttggcaccggcc
ttggtgggcgggctctactggaaacacggcaatcgcgccggggtgtttctcggcatggcg
gcgggcttcggtctatggggctttttgttgctcaagggctcgggtgcctgggaaggcgtg
ctggcaggtcaatttgaactgttaaaggcgcttaagcccaatgtcaacgataccctgttg
gcactcggcgccaacctgattggctatatcggcggctctatctggttgcgcgccggcttg
gtggagcgtattcaggccagcgcctttgtcaccccgggtgaactcaaaaacacaggtaat
cgcaagacgggccccattagtcagcaggacttgctgatcctggccagtcgctttgtcagc
ccgacccgggcctatgagagtttctcgcgcttttctgccgatgcggtgcgcagcgatagc
tggcacaagacggcaccgcccgagcttattgcccataccgagcacatgctggccggggtg
ctgggggcttccagcgcctctttggtgatggactcagtgttgcaggggcgggatctggcc
ctcgatgaagtcttcagcctggtggatgaggcctcgtcgaagattattctcagtcaggac
atgctgcgcgccgccatagaacacgcctacgagggcatgagcgtggtggacaaagatctc
aacctggtggcctggaactaccgctatgcagagctttacgactatccggaggatttcctg
caaccgggcatgcccatcagcgaggtgatacgtttcaatgcctcccgcggctactgcggc
ccgggggatgtgaacgagcatgtcgagcgccgggtacagcatatgcgcaacggcaccgcc
cacagctcagagcggcgcaggcgcgatggcaaggtgatcaagattcagggcaatcccatg
ccggacggcggctttgtgatgacctttaccgacattacccaatatcgcgagcagcaacag
gcgttggagcaagtcaacgaaaccctggaggccagagtcaaggagcgcacctatgagctg
gcgctgctcaacagcaagctgctcgaagccaaggcccaggaggagatggccaacgcttcc
aagagccgtttcctggcggcggtggggcatgacttaatgcagccgctcaatgcggcccgg
ttgtttaccgcctctttgagtcagtatcctgggcttgacagggaagggcggctgaccctc
tcccatgtcaacagctcactgaaaaccgccggtgaactgctgaccgatcttttggatatc
tccaagctggattccggcatggtggaggtaaaacggcgcgactttgccatctccgaagtg
ctcaacgccctggcggtggagtttgaggccatggccaaagactgccagatccgctttgcc
atgatgccctgcagcctgacggtcaattcagacccgtcactgctgcggcgggtgctgcag
aactttctcaccaacgcctatcgctatgccaagggcgggcgggtgctgatgggctgtcgc
cgccgcggcagcgagcttgaggtgcaagtgctggatacaggttgcggcatcgaagccggg
cagcttagggagatatttcacgagttcaagcgcctggataacccccattccaacagtgtc
aacggcctggggcttgggctggcgatagccgacagaataagcaaagtgctggagcatgat
atccgtgtatcttctgtgcagggcaagggctctgtatttgccattcgggtgccgcttggg
gccactgtcagcgtgccgcaacccaaggccatctcttctgtgttgcagccgctcgccggg
gtcaaagtgctgtgtatcgacaacgaagaggctatcctcgccgggctcgaaagcctgttg
agtcgctggcagtgcgaggtgatctgcgcccgggatctgagtgatgccaggatcaagctg
gggctcaaaggggtggcgccggacatcatgctggcagattatcatctggataagggccaa
aacggcgtcgatgccatggatgagctcagggcgctgtatgggcaacatctgcccggtatt
ttgatcaccgccaacacccgtaaggatctggtggaggatgtcgagcgccgcggttaccac
tatatggccaagatgattaaaccggcggcgctcagggctttgatctcaagcctggtgaag
aaggcgtaa
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