Shewanella carassii: TUM17387_24130
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Entry
TUM17387_24130 CDS
T07543
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaa03032
]
TUM17387_24130 (topB)
Enzymes [BR:
scaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TUM17387_24130 (topB)
DNA replication proteins [BR:
scaa03032
]
Prokaryotic type
DNA Topoisomerases
TUM17387_24130 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Siva
Motif
Other DBs
NCBI-ProteinID:
BCV67054
LinkDB
All DBs
Position
complement(2715271..2717307)
Genome browser
AA seq
678 aa
AA seq
DB search
MILYIAEKPSLGRAIAEVLPKPHRKHEGYIELGNGDCVSWCIGHLLEQAEPDAYDPAYKS
WQLEHLPIVPSDWQIKPKASSRGQLSVLRKLVKQASELVNAGDPDREGQLLVDEVIAHLG
VKGDKLAAVKRLLISDLNPQAVKRALGQMRSNREFVPLSTSALARSRADWLYGMNMTRAY
TLQGRKVGYQGVLSVGRVQTPVLGLVVRRDQEIAAFVPKPFYEVLAHLSTQEGSCFSARW
QPSEACQPWMDEEGRVLSRGLAMNVVGRITGQPGRVDELERKQRHQAPPLLYSLSALQID
CAKRFGMSAKEVLDTAQSLYERHKLITYPRSDSRHLPKAQFQLAPAVLNAITQGAAELQQ
GCEVPNPALKSKAWNDAKVDAHHAIVPTEKTASLGVLSQRERQVYLQIARQYLAQFYPNY
EYLETRAVIDIAGGCFVAKAKQPLKQGWKQLFGKQKADDEAEDIQTALPELTQGQMLDCL
KGELVEKMTQPPKHFTDATLLAAMTGISRYVKDPEIRKILKETDGLGTEATRAGIIELLF
KRGFLKRQGKNILATEAGSGLIQSLPEVATTPDMTALWESSLDAICRRELKYQAFMQPLT
AKLGELIEQAKAQLPTALSGVKSTGFKGRKRRSGAYATKTGASKGTSTKKSTGDKAGAGK
RNYRSATKSKTKAQSATS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatcctctatatcgccgaaaagcccagccttgggcgcgccatcgccgaggtgctccca
aaaccccatcgcaaacatgagggctatatcgagcttggcaacggagattgtgtttcctgg
tgtataggtcatctgctggagcaagctgagccggatgcttacgatcccgcctacaagtcc
tggcagttggaacatctgcctattgtcccgtctgattggcagattaaacccaaagccagc
agtcgcggccaactcagtgtcttgcgtaaattggtcaagcaggccagtgagctggtcaat
gccggcgatccggaccgggaagggcagctgttggtggatgaggtgattgcccatcttggg
gtcaagggcgataagctggcagcggttaaacgcttgttgataagcgatctcaacccgcag
gcggtaaaacgcgccctggggcagatgcgcagcaaccgcgagtttgtgccattgtcgact
tcggcactggcgcgtagccgagccgattggctctacggcatgaatatgacccgtgcctat
accctgcaggggcgcaaggtgggctatcagggcgtgctgtcggtcggtcgggtgcaaact
cctgtgcttggtttggttgttcggcgcgatcaggagatagccgcctttgtgcctaaacct
ttttatgaagtactggcccatcttagcacccaagaggggagctgtttcagcgcccgctgg
cagcccagtgaggcttgtcaaccttggatggacgaagaggggcgggtgctctcccgcggt
ttggcgatgaatgtggtcggcaggatcaccggccaacccggccgggtagatgagctggag
cgtaagcaaagacaccaggcgccgcctttgctctatagtctgtctgcgctgcagattgat
tgcgccaaacgcttcggtatgagcgccaaagaggtgctggatacggcgcagtctctgtac
gaacggcataaattgataacctatccgcgctccgatagccgtcacctgcccaaggcgcag
ttccagctggccccggcagtcttgaatgccattacccaaggggcagctgagctgcagcaa
ggctgtgaagtgcccaatcccgcccttaagtctaaggcctggaatgatgccaaggtggac
gcccatcacgcgatagtgcctacggaaaagacggctagcctcggtgtgttgtcacagcgt
gagcgtcaggtgtatttgcagatcgcccgtcagtatttggcgcagttttaccccaattat
gagtaccttgaaacccgcgccgtgatcgacattgccggaggttgcttcgtggccaaggcc
aaacaaccattgaaacaggggtggaagcaattgtttggcaaacaaaaagccgacgatgaa
gcggaagatattcaaactgctttgcctgagctgactcaggggcagatgctggattgcctc
aagggtgaactagtggaaaagatgacccagccccccaagcattttaccgacgccacactg
ctggcggcgatgacaggcataagccgctatgtgaaagacccagagatccgcaaaattctc
aaggaaaccgatgggctggggacagaagcaacccgcgccgggatcattgaactcttgttt
aaacgtggctttttgaaacgtcagggcaagaatattttggctaccgaggctggcagcggg
cttattcaaagcctgcctgaagtggccaccacgccggatatgacggcgctgtgggaaagt
agcctagatgcgatttgtcgccgtgaacttaaatatcaggcctttatgcagcccttgacg
gctaaactgggcgagcttattgagcaggccaaggcacaactgcctacggccttgagtggc
gtgaaaagtacaggcttcaaaggacgtaaacgtcgcagtggtgcttatgctactaagacc
ggcgcgtccaagggcacaagcaccaaaaagagcactggcgataaggccggcgccggcaag
cgcaactatcgttcagcgaccaagagcaaaaccaaagcccagtctgcaacttcctga
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