Shewanella carassii: TUM17387_24300
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Entry
TUM17387_24300 CDS
T07543
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
scaa
Shewanella carassii
Pathway
scaa00071
Fatty acid degradation
scaa00280
Valine, leucine and isoleucine degradation
scaa00310
Lysine degradation
scaa00362
Benzoate degradation
scaa00380
Tryptophan metabolism
scaa00410
beta-Alanine metabolism
scaa00640
Propanoate metabolism
scaa00650
Butanoate metabolism
scaa00907
Pinene, camphor and geraniol degradation
scaa00930
Caprolactam degradation
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01120
Microbial metabolism in diverse environments
scaa01200
Carbon metabolism
scaa01212
Fatty acid metabolism
Module
scaa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
TUM17387_24300 (fadJ)
00650 Butanoate metabolism
TUM17387_24300 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
TUM17387_24300 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
TUM17387_24300 (fadJ)
00310 Lysine degradation
TUM17387_24300 (fadJ)
00380 Tryptophan metabolism
TUM17387_24300 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
TUM17387_24300 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
TUM17387_24300 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TUM17387_24300 (fadJ)
00930 Caprolactam degradation
TUM17387_24300 (fadJ)
Enzymes [BR:
scaa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
TUM17387_24300 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
TUM17387_24300 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
TUM17387_24300 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
LEM
Motif
Other DBs
NCBI-ProteinID:
BCV67071
LinkDB
All DBs
Position
complement(2739314..2741458)
Genome browser
AA seq
714 aa
AA seq
DB search
MQMENSNKSFSLSRRDDGIAILSMDVPGESMNTLKAEFGPEISALLSEIKTDSSIKGLVI
ISGKPDSFVAGADISMLDACQSAADARELSSSGHKVFAELEGLKIPVVAAIHGACLGGGL
ELALACHLRLCSDDKKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQVRPK
QALKMGLVDDVVPKSILLEAAVELALAGKAKRGKGKNNKPMMNKLLESNGFGQKIIFDQA
RKQVARKTQGNYPAPDKIIDCVRVGMSQGIEAGLATEARHFGELVMTPESAALRSIFFAT
TEMKKETGAEGAEPSPVHKAVVLGGGLMGGGIASVTTTKAKIPVRVKDISEQGLSNALGY
AYKLLDKGVKRRHMTPAVRDKQMALMTTTTDYVGVKDADIVVEAVFEDLNLKHQMVRDIE
RECGEHTIFASNTSSLPIGQIAEAAARPENVIGLHYFSPVEKMPLVEVIAHDKTSPQTIA
TTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAAQLLLEGNSVESLDKALVKFGFPVG
PITLLDEVGIDVGAKISPILEKELGERFAAPSAFDKLLSDDRKGRKNAKGFYLYGPKAGK
KKEVDKSVYQVLGIAPGVGAENANLAERCVVQMLNEAVRCLEEGIIASARDGDIGAIFGI
GFPPFLGGPFHYIDTMGADQLLAKLERFQSRFGDRFAPSELLKTMAAEGRRFFD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
ttgcagatggaaaacagcaacaagagttttagcctcagccgccgcgacgacggcattgcc
attctttccatggatgtacccggcgaaagcatgaataccctcaaggccgaattcggccct
gagatcagtgccttgctgagcgaaatcaaaacagacagcagtatcaagggcttggtgatc
atctcaggcaagcccgactccttcgtggccggcgcagatatctccatgctcgatgcctgt
caaagcgccgccgatgcccgcgagctgtcgagctcagggcataaggtgtttgccgaactg
gaagggctgaagatccccgtggtggcagccattcacggcgcctgtctcggtggcggcctc
gagctggcactggcttgtcatctgcggctgtgcagtgacgacaagaaaaccatgttgggg
gtgccggaagttcagctcggtctgctgccgggcggtggtggaacccagcgtctgccacgc
ctggtggggatcaccacagcgctggatatgatgcttaccggtaaacaggttcgccccaag
caggcgctgaagatggggctggtggacgatgtggtgcccaagtcgattctgctggaggcg
gcggttgaactggcattggccggcaaagccaagcgcggtaaaggcaaaaataataaacct
atgatgaacaagttgctcgaaagcaacggctttgggcagaaaatcatctttgatcaggcc
cgtaaacaggttgccagaaaaacccagggtaactatccggcgccggacaagatcatcgac
tgtgtgcgagtagggatgagccaggggatagaggcaggtttggccacagaggcgcgccat
ttcggcgagctggtgatgacgcccgagtcggcggcgctgcgctccatcttctttgccacc
acagaaatgaaaaaggaaaccggcgccgaaggtgctgagcccagtccggttcacaaggcc
gtagtgctcggcggaggcctgatgggcggcggtatcgcctcagtgaccaccaccaaggcc
aaaattccggtgcgggtcaaggatatcagtgagcagggactcagcaatgcgctgggctat
gcctataagttactggataagggcgtcaagcgtcggcatatgaccccggcagtgcgcgat
aagcagatggccttgatgacgacgactacagactatgttggggtaaaggatgccgacata
gtggtcgaggcggtatttgaggatctcaatctcaagcatcaaatggtgcgggatatcgag
cgcgaatgcggtgaacacactatttttgcttccaacacctcgtctctgcccataggtcag
attgccgaagccgccgccagaccggaaaacgtcatcggcctgcattacttctcgccggta
gagaagatgccgctggtggaagtgattgcccacgacaagacctcgccccagacgatagcc
accacagtggcctttgcccgcaaacagggcaagacaccgatagtggtgaaagacggcgcc
ggtttctatgttaaccgtatcctggcgctctatatgaatgaagcggcgcagctgctgctt
gagggcaacagtgtcgagagcctggataaggcgctggtgaagtttggtttcccggtcggc
cctatcactctgctcgatgaagtgggtatcgatgtgggcgccaagatttcgccgatactc
gaaaaagagttgggtgagcgtttcgctgccccctctgctttcgataagctgctctccgat
gaccgcaaggggcgcaagaatgccaagggcttctatctctacggtcctaaagccggcaag
aagaaggaagtggacaagagcgtttatcaagtgctggggatagcgccgggtgttggcgcc
gaaaatgccaacctggcagagcgctgtgtggtgcagatgctcaatgaagcggtgcggtgt
ctggaagagggcatcatagcctctgcccgcgatggtgatattggcgccatcttcggcatt
ggcttcccgcctttcctcggtgggcctttccactatatagacaccatgggcgccgatcag
ttgctggccaagctggaacgcttccagagccgtttcggcgacagattcgccccgagcgaa
ttgctcaagaccatggctgccgaagggcgacgcttcttcgactga
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