Shewanella carassii: TUM17387_24540
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Entry
TUM17387_24540 CDS
T07543
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
scaa
Shewanella carassii
Pathway
scaa00230
Purine metabolism
scaa00240
Pyrimidine metabolism
scaa01100
Metabolic pathways
scaa01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
TUM17387_24540 (nrdD)
00240 Pyrimidine metabolism
TUM17387_24540 (nrdD)
Enzymes [BR:
scaa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
TUM17387_24540 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
BCV67095
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Position
complement(2764193..2766310)
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AA seq
705 aa
AA seq
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MPVVIKRDGCRTQFDETRIKDAVLAASSHCGIEDEDYAATVAALVTQAVADKAEVNIQEL
QDKVENLLMEGPYKQVARSYIEYRHDRDICRESSSRLNLEIRGLVEQSNATLLNENANKD
SKVIPTQRDLLAGIVAKHYAKHHILPKDVVAAHEAGELHYHDLDYSPFFPMFNCMLIDLG
GMLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYD
KHYQTALKWGITDAKAFATEQTKKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW
ESRLIQESILRIRMEGLGKNRKTAVFPKLVFAIRDGINHKAGDCNYDIKQLALECASIRM
YPDILNYEQVVKVTGSFKTPMGCRSFLGTYEENGELLHEGRNNLGVVSLNLPRVALEAKG
DEAEFYRILDQRLAMARKALDTRIERLANVKARVAPILYMEGACGVRLRGDDNVAEIFKN
GRASISLGYIGLHETINALYGTDTHVFDDEVLRQKAVAIVAYLKAATVRWKEETGYGFSL
YSTPSESLCSRFAKLDAKSFGLVKGVTDKGYYTNSFHLDVEKKVNPYDKLDFEQPYPELA
SGGFICYGEYPNMQHNLEALENVWDYSFNRVPYYGTNTPIDECYDCGFTGEFSCTSKGFT
CPKCGNHEPTRVSVTRRVCGYLGSPDARPFNHGKQEEVKRRVKHL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccggtagtgattaagcgggacgggtgccgtactcagttcgatgagacaagaataaag
gatgcggtgctggcagcctcgagccactgcggtatagaagatgaggactatgcggcgacc
gttgcagccttggtgactcaggccgtggctgacaaagccgaggtcaatatccaggagctg
caggacaaagttgaaaatctgctgatggaaggcccttacaaacaagtggcccgcagttat
attgaatatcgtcatgatagagacatctgccgtgaatccagcagccgtctgaacctggag
atccgtggtctggtcgagcagagcaatgcgactctgctcaatgaaaacgccaataaagac
tccaaagtgatccccacccagagggatcttttggccggtatcgtcgccaaacattatgcc
aaacatcatattctgcccaaggatgtggtggctgcccatgaggccggtgagctccactat
cacgatctcgattattcgcccttcttccctatgttcaactgtatgctgatcgatctcggt
ggcatgctgactcatggcttcaagatgggcaatgccgagattgagacaccaaaatccatc
tccacggcgacggcggttactgcacagatcatcgcccaggtcgccagccatatctatggc
ggcaccacaatcaaccgcatagacgaagtgctggcgccctttgtggccaagagctacgac
aagcattatcaaacggcactcaagtgggggattaccgacgccaaggcgtttgctaccgaa
cagaccaagaaagagtgtcacgatgccttccagtcactggagtatgaggtcaatacgctg
cataccgccaatggccagacaccttttgtgaccttcggttttggtttgggtaccagttgg
gagtcacggctgatccaagagtctattttgcggatccgtatggaaggtctgggcaagaac
cgtaagacagcggttttccctaaattagtgtttgctattcgcgacggcatcaaccacaag
gccggcgactgcaactacgatatcaagcagttggcgctcgagtgtgccagtattcgcatg
tatccggatattctcaactatgagcaggtggtcaaggttactggctcgttcaagactccg
atgggctgccgtagtttccttggcacctatgaggaaaatggcgagttgttgcacgaaggc
cgtaacaacttaggtgtggtcagcctgaacttgccgagagtcgcgctggaagccaagggg
gatgaagccgagttttatcgtattttggatcaacggctggcgatggcccgcaaggcgctg
gatacccgtatcgaacgtttggccaacgtcaaggcccgagtggcgcccattctttatatg
gaaggggcctgcggcgtgcgcttgcgtggggatgataatgttgccgaaatcttcaaaaac
ggccgtgcctctatttctctgggctacattggcctgcatgagacaatcaacgcgctttat
ggtacagacactcatgtgtttgatgatgaggttttacggcaaaaggccgtggctattgtt
gcctacctcaaggcggccactgtgcgttggaaagaggaaaccggttatggtttcagcctt
tacagcaccccgagcgagagcctgtgcagccgttttgccaagctcgatgccaagagcttc
ggtctggtaaaaggggtcaccgacaagggctattacaccaatagtttccacttggatgtg
gagaaaaaggtgaatccttacgacaagctcgactttgaacagccgtatcccgagctcgct
agtggggggttcatctgctatggcgaataccccaatatgcaacacaaccttgaagcgctt
gagaatgtctgggactacagctttaaccgtgtgccttactatggcaccaatactccaatc
gatgaatgttacgactgtggctttaccggtgagtttagctgcaccagcaagggctttacc
tgtcccaagtgtggcaaccatgagccaactcgagtatctgtgacccgcagggtctgtggt
tatctcggtagtccggatgccagacctttcaaccacggtaagcaggaagaggtcaagcgt
cgggttaaacacctataa
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