Shewanella carassii: TUM17387_24800
Help
Entry
TUM17387_24800 CDS
T07543
Name
(GenBank) porin
KO
K09476
outer membrane pore protein F
Organism
scaa
Shewanella carassii
Pathway
scaa01501
beta-Lactam resistance
scaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TUM17387_24800
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TUM17387_24800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_24800
01504 Antimicrobial resistance genes [BR:
scaa01504
]
TUM17387_24800
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_24800
Antimicrobial resistance genes [BR:
scaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
TUM17387_24800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
BCV67121
LinkDB
All DBs
Position
complement(2793556..2794755)
Genome browser
AA seq
399 aa
AA seq
DB search
MNKTLIASVLAGLLTIPSAQAIEIYKDQKNAVSIGGFVDARVINTQGETEVVNGASRINF
GFERELTHGWNAFVMLEWGVNPFGNSDIVYSSKFESVQDDFFYNRLGYAGLSHDKYGTLT
IGKQWGAWYDVVYNTNYGFVWDGNAAGVYTYNKDDGAINGTGRGDKTVQYRNSFGDFSFA
IQTQLKHDGFDMDESSGTNPFPPRDHAPVAGTAATATTATKVEFNNTYGIALTYAVSKDL
SLMAGYNYGEFEATRADGSTFSESDYIYGAGITWGGWDNQGLYAAANVNKNEFHDTDNLG
RLIPESYGVETLVSYRFDNDIRTFVSYNLLNAGDAYEQAYDGDVFKRQFVVMGVHYIWDA
NTVLYVEGRKDFSDFEGAKEAEMELSEDDGIAIGIRYTL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactctcatcgcatcggtcctggcaggactcttgaccattccatcggcgcaa
gccatagaaatctataaagatcaaaaaaatgcagtctctatcggcggtttcgttgatgcc
cgagtgatcaatactcagggggaaacggaagtcgtcaatggtgcttccaggattaatttt
ggctttgaacgtgagttgacccatggctggaatgcgtttgtgatgcttgaatggggtgtc
aacccattcggtaacagtgatattgtctatagcagcaagtttgaatcagtccaggatgat
ttcttctacaatcgtcttggttatgcgggactgtcccacgacaaatatggcaccttgacc
ataggtaagcagtggggcgcctggtatgatgtggtgtacaacaccaactatggcttcgtg
tgggatggtaacgctgccggcgtttacacctataacaaggacgatggcgccatcaatggt
accggccgtggcgacaagacggttcagtatcgtaatagttttggcgatttcagctttgct
atccaaactcagctgaagcacgatggcttcgatatggacgaaagttcaggtaccaacccg
ttcccgccaagggatcatgcgccagttgccggcactgctgcgactgccacaaccgccacc
aaggttgaattcaacaatacttatggcattgccttgacctatgcggtcagcaaagatctt
agcctgatggccggctataactatggtgagtttgaagcgacccgcgcagatggcagtact
ttctctgagtctgactatatctatggtgcaggtatcacttggggtggttgggataatcaa
gggttgtatgccgctgccaacgtcaacaagaacgagttccacgatacagataacctgggg
cgtttgatccctgaatcttatggtgttgaaactctggtttcttaccgctttgataatgat
atccgtacttttgtctcttacaacttgctgaatgccggcgatgcctacgagcaggcttac
gatggtgacgtgtttaaacgtcagttcgtggtaatgggtgttcactatatatgggatgcc
aatacagtgttgtatgttgaaggccgtaaagacttttccgatttcgagggagccaaagag
gctgagatggaattgtctgaagacgatggtatcgctatcggtattcgctataccctttga
DBGET
integrated database retrieval system
