Shewanella carassii: TUM17387_25320
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Entry
TUM17387_25320 CDS
T07543
Symbol
sdaR
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scaa03000
]
TUM17387_25320 (sdaR)
Transcription factors [BR:
scaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
TUM17387_25320 (sdaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
BCV67173
LinkDB
All DBs
Position
2855566..2856714
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AA seq
382 aa
AA seq
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MYFLDAATAQQIVDRTMNIIDHNINVMNSQGVILGSGDKQRLNSVHEGALLAIAQNRTVV
IDEGSRHSLHGVKPGINLPLHYHGKIIGVVGITGNPAELLHYGELLKMTAEMMVEQANSL
ELDLWHKRQREEFILQLLKRDSYSESDFCAWAAQLQIDLQKPRVAAVIELAKGESKATDL
KEIQRLLEYPQRDNLVAMTAMDQLVILKPAFLDGRSWDPALEDLRIEKLLARLPADTQGR
LKIALGHFFPGEGGIRRSYQTALETLRLGKKRAPEKTKYLYQDHALAVLLSGLVNSWRGQ
ELAAPFRKLQQHDKKGLLLRTLSAYLQHFGDQQQCAKALFIHRNTLRYRLERISEITGIE
LQSLDGLLQLYLGEVLSRLEHK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctcgacgccgcgaccgcgcagcagatagtggatcgcaccatgaacatcatc
gaccacaatatcaatgtgatgaacagtcaaggggtgatcctcggctctggcgacaaacag
cgactcaacagtgtccatgaaggcgcccttctggccatagcccaaaaccgcactgtggtg
atagatgaaggcagtcgccacagcctgcacggcgtcaaacccgggatcaacctgccgctg
cactaccacggcaagataatcggcgttgtcggcattaccggtaatccggcagagctgctg
cactatggtgagctgttgaaaatgactgccgaaatgatggtcgagcaagccaactccctc
gagctggatctctggcataaacgccagcgggaagagtttattctgcaactgctgaaacgt
gacagttatagcgaaagcgatttttgtgcctgggccgcccagctgcagatagatctgcaa
aaacccagagttgccgccgtgatagaactagccaaaggcgaaagcaaggccactgatctc
aaggagatccagcgtttactcgagtatccgcaaagggacaatctggtggccatgaccgcc
atggatcagttggtgatcctcaaacccgcctttctcgatggtcgcagctgggatccggcg
cttgaggatctgcgaatcgagaaactgcttgcccgtttgcccgccgacacccagggccga
ctcaaaatcgcgctggggcatttctttcccggtgaaggcggtattcggcgttcatatcaa
accgcgctggaaaccctgagattagggaaaaagcgcgcgccggaaaagaccaagtacctc
tatcaggatcacgcgctggcggtattgttgtccgggctggttaatagctggcgcggtcag
gagttggctgcaccttttcgcaaactgcagcagcatgacaaaaaggggctgttgctgcgt
acactgagtgcctatctgcaacacttcggtgaccagcaacaatgtgccaaggcattgttt
attcaccgtaataccctgaggtatcgtctggaacgtatcagtgagatcaccggcatagag
ctgcaaagcctggatggattgctgcaactctacctgggagaggtcctcagtcgcctggaa
cacaaataa
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