Shewanella carassii: TUM17387_25630
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Entry
TUM17387_25630 CDS
T07543
Name
(GenBank) choline transporter
KO
K02168
choline/glycine/proline betaine transport protein
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_25630
Transporters [BR:
scaa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TUM17387_25630
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BCCT
DUF4235
Motif
Other DBs
NCBI-ProteinID:
BCV67204
LinkDB
All DBs
Position
complement(2888167..2890152)
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AA seq
661 aa
AA seq
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MIKSSINPPVFFSSVICIAFMVLVCAVWPNEAQELFKSAQSWLELKAGWLYIMGVAIFLV
FIIFVMVSRFGDIKLGPDHAEPDYSYKSWIAMLFSAGMGIGLMFFGVGEPVMHYLAPPDA
DPQTVEAAKEAMKITFFHWGIHAWAIYAVVALSLAYFSYRHKLPLLPRSALYPLIGERIY
GPIGHCVDTFAVLGTMFGVATSLGFGVLQVNSGLNYLLGDSFPISSTVQVALIIGITLIA
TGSVFSGLDKGVKRLSELNLGLAFVLMMIVLLFGPTVALLQSFVQNTGSYLSELVSKTFN
LYAYEQKNDWLGGWTLLYWGWWISWSPFVGTFIARVSRGRTIREFLVGILFVPSGFTFLW
MTVFGNSAIDAIMNHGAEYLATAVSTDVSVALFTFFEHLPLSSLLSVIAVCLVVTFFVTS
SDSGSLVIDNLTSGGDADAPVWQRIFWALMQGVVASVLLLAGGLQALQTAAIASAMPFLL
VMLLICFGLFKALQDDWLKINSVQLHTTSVQYARTSVSWEDRIDVLVSHPSYEQARHFVD
NVATPALSKVSQGFLSRGINADLQYDEDRVRLVIENEEGQTFVYGLRIRAFTLPVTHQTQ
EEGEDESQNNYFRVEVFLEHGGQYYDVMGYTEEQIQADVVTQYEKHLHYLHLSSAEYVEG
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgattaagtcgagtattaatcctccggtgtttttttcgtcagtgatctgtatcgccttc
atggtgttggtgtgtgccgtctggccgaatgaggcgcaggagctatttaagtcagctcag
tcctggctggagctgaaggccggctggctctacatcatgggcgtggccatttttctggta
tttatcatctttgtgatggtgagtcgcttcggtgatatcaagcttgggccggatcatgcc
gagccggattacagctacaagagctggattgccatgctgttctccgccggtatgggcata
ggcttgatgttctttggggtcggtgagcctgtgatgcactatctggcgccgccggatgcg
gatccccaaacagttgaagccgccaaagaggcgatgaagatcaccttcttccactggggg
attcacgcctgggccatctatgcggtagtcgccctgagtctggcctatttcagctatcgg
cataagttgccgctgctgccacgaagtgccctctatcctctgattggtgaacgtatttat
ggccccataggtcactgcgtcgacacctttgcggtgttgggtaccatgtttggtgtggct
acctcattgggtttcggggtattgcaggttaactcgggactcaactatctgttgggtgat
tctttccctattagcagcactgtgcaggtggcactgatcataggtattactcttatcgcc
accggctctgtgttttccggcctggataaaggggtgaagcgtttaagtgagcttaacctc
gggctggcttttgtgctgatgatgatagtgttgctgtttgggccaacagtcgctctgctg
cagtctttcgtgcaaaacaccggcagctatttgagtgagctggtgagcaagacctttaac
ctctacgcctacgagcagaagaatgactggctcggtggctggactctgctctattggggc
tggtggatctcctggtcaccttttgtcggtacctttatcgcccgggtctcccgtggccgc
accattcgagagtttttggtagggattttgtttgttcccagtgggttcaccttcctgtgg
atgacagttttcggtaactcggcaattgatgccatcatgaatcacggtgccgaatatctg
gctactgcagtttccaccgatgtgtcggtcgccctgtttactttcttcgagcacttgccg
ctttccagtttgctgtcagtcatcgccgtgtgtctggtggtaaccttctttgtgacttcg
tcggactcaggctctttggtgatcgataacctgacctcaggcggcgatgccgatgcgcct
gtatggcagcggatcttctgggccctgatgcaaggtgtggttgcctctgtgctgctgctc
gccggtggcttgcaggcgctgcaaacggcggcgattgccagtgccatgccgttcttgttg
gtgatgctgcttatctgctttggcctgttcaaggcgctgcaggatgattggctcaaaatc
aacagcgtgcagctacataccaccagcgtgcagtacgccagaaccagcgtgtcttgggaa
gacaggatagatgtgctggtgtcgcatccctcctatgaacaggcgcggcactttgtcgac
aacgtggcaacgccggcgctgtccaaggtttctcagggtttcttgtcccgcggtatcaat
gccgatctccaatacgatgaagacagggtgaggttggttatcgaaaatgaagaggggcag
acttttgtctatggtttgcggatccgcgcctttacgctgcctgtgacccatcagactcag
gaagaaggtgaggatgaatcacaaaataactacttccgggttgaagtctttctcgaacac
ggtggacagtattatgatgtgatgggttatacggaagagcagatccaggcagatgtggtg
actcaatatgagaaacacctgcactatctgcatctgtccagcgcagaatatgtagagggc
ccttaa
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