Shewanella carassii: TUM17387_26060
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Entry
TUM17387_26060 CDS
T07543
Name
(GenBank) hypothetical protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
scaa
Shewanella carassii
Pathway
scaa00520
Amino sugar and nucleotide sugar metabolism
scaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
TUM17387_26060
Enzymes [BR:
scaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
TUM17387_26060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
K319L-like_PKD
SprB
Ig_2
Motif
Other DBs
NCBI-ProteinID:
BCV67247
LinkDB
All DBs
Position
complement(2940998..2946013)
Genome browser
AA seq
1671 aa
AA seq
DB search
MSSDTNKEFTIEVIRAPLSVEVGQSTVVEVQFQQNGQNINGASYLWMDESASPIGLGSNS
NKGFFVAPSNLEQASIRVTASFSGISVSKDVTIDITSPVDVIGDVESLEVTGPTEVTSEH
KVILNAAYTVNGLVDSDKAVIWELFSEQTVSWQQIDNRVEFTAPDVFQDTELYFSAQTED
ASGLLFDTIVVLTVKPKGISFVNQINTGTGKVDANSQSSHTVKQSTSGQTVHLTAKAEKS
GGGGSFSYEWQQLSGTTVNLIDSASQTASFVAPKQPGKLEFKVTAREVSSGKSTSQTQLV
EIKPGPFQPQQGAKYQVYNGHGSVSLTAEVNGGTGPFTYKWTQTKGPDATISSVNEKTTE
VTPPAVATDTDFQWVVQVTDANGHQVSITHDIQVKATASLSVQIIKPKGCTTNCLVEEGD
SVYPAATITGALGRVSVLWESSDVTLTDATTEHPAFVVPNVNAETGIRVNVTVTDGTSTV
SDSLLYTAKPVFKLVPHQNQIGSHLATGPGVSTAAPVQVESGKTFKPSIDIHIPPLDNGA
SLSYRWTVIEPNPKPSDLIIVGDNTAQPIINAPSVSSNTNIKLQATITYTSTEGKVITKT
TDTQFQAVPANAPSKPTLALSMAGHESVYSGHVVQPKTTVMNASGPLSYQWTQLSGPTIT
IADDKTDSPSFTAPSVSGHQDIVIEVEVSDGSAVAKAQMTVTVDPVVAPPKLPLTVTASN
DATITANQTVKPRVSVGNTFGTLSYSWVETTSSGITLTDANTATPSFIAPSGPATVTLKV
TVNDTANGSATDSVTYHVNDALQVTAGPATRTLAEGNTLKLLASVKDADGAVSYAWTIAD
ASTTFLTTKNITNASSANASLDLPNVDANTTIKLQVTATDSVNTATATMAVTIQDRHMSV
DLGADFDLPPMQTGHLNANVAGGKPPYTYSWTDDTNAVLSSTNDANPSFIAPFLTHEAQL
NYNLTVTDSLGNTAKDSIVVTVPALPLLVSAGNDFSVAESLSGVQLHGSVQHANAPVYAW
TQISGIDVTPLINANTLNASFTSPAKAAGTSEDLVFELSVTSNGIVKKDQVTVTVQGQPD
LSVHVTPALYVNEGQSVSLVGTVIDADSSSPATVQSLTWSQFPTAASPVTLSNSGVTGDV
RSLTSTFTAPAFATNNQYVFTFTAQGTGNRVSKTAMVEVLAAPSISAGADLRVRAGQTVN
LSATGISIASYQWAQTAGSPTVTLNNADKYNPSFTAPDVTSDTTLTFIVTGTPIAGGAAQ
QDTINVVVYEPAIVVRPKGATNLSFTEGDPALDITVDFVSSVGNAPVTPTTITWSVTPDM
APAGTFGPLNAATIGINPQVGSAGTYKLDIVAGDTPDHYQAGSQSYTVVIKSGTPTTPPL
IDSSKLTAALKSINTDLTSLNGIDKLVSLHAPAITGGTPPYSYRWTPPAKGVVLSGETTD
NPTATISKPASECTYIGGDITLTVTDAKGQTVSATLPVKNSRGGDAVNPTPTSPVSCDVC
RGPKFICERSHKTAVCGSVAAGNPESLASAEFYKYQYCINDVENLIDGSRYVTRRCATAE
TVNKELESRAKNPAWLGKLTSVGTDPAVGCQKYNVHDLQDAHFSCSFVCKGKVGGGFDSG
GARGCNIETVPAVSNNSIQLSESDYPVPTAPATIPGTGSPGTCPNGIQPAM
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggatacaaataaagagtttacaattgaggtgatccgcgcgcccttatccgtt
gaagtgggtcaatctacggtggttgaggttcagtttcaacaaaatggacaaaatattaat
ggtgcaagttacctctggatggacgagagtgcatcaccaattggcttaggtagtaacagt
aataagggtttctttgtcgcaccgtcaaatcttgagcaagcgagcattcgtgtaacagct
agtttttcaggtatctcggtaagcaaggatgttaccatagacatcacctcaccggttgac
gttattggagatgttgagtcattagaggttacaggcccaacggaagttacttcggaacac
aaggtcattttaaatgcggcctatacggttaatgggttggttgatagcgacaaggcagta
atttgggaactgttcagtgaacaaacagtatcttggcaacaaatagataatcgagtcgag
tttacagcacctgatgtttttcaggacacagagttatatttctcggcacagactgaagat
gccagcggcctgttgtttgatacgattgtggttctcacggttaagcccaagggcatcagc
tttgttaaccagattaataccggaacgggcaaagttgacgcaaactctcaatcgtcacac
acagttaagcaaagcacttcagggcaaacagttcacttaacggcaaaagccgaaaaatcc
ggtggcggtggaagcttcagctatgaatggcagcaattgagcggtaccacagtcaactta
atagacagcgccagccaaaccgcgtctttcgtcgcgcccaagcagccgggaaaactcgaa
tttaaagtaacagctagggaagtcagtagcgggaaaagcacatcacaaacacagctagta
gaaataaagcctggaccttttcagcctcagcaaggcgctaagtatcaagtgtacaatggt
catggctctgttagtttgactgcagaggttaatggtggcacggggccttttacctataaa
tggacgcaaacaaaaggtccagacgctacgattagtagtgttaatgaaaaaactaccgag
gttacgccgccagcggttgcaaccgataccgacttccaatgggtcgtgcaagtaactgat
gccaatggtcaccaagtgagtattacacacgatattcaagtgaaggcaactgcgtctttg
tcggtacagattattaaaccaaagggctgcaccaccaactgtttagttgaagaaggggat
tcagtgtatcctgcagcaactattaccggtgcgcttggtcgtgtatcagtattgtgggag
agcagcgatgttaccttaactgatgcaacaacagagcaccccgcgtttgttgtgcccaat
gtcaatgcagaaacaggtattagagtcaatgttactgtaacagatggcaccagtaccgtt
tccgattcgctactttacaccgctaaacccgtatttaagctggtgcctcaccaaaaccaa
ataggtagtcacttggcaacaggcccgggagtcagtacagcagctcccgttcaggtagaa
tccggcaaaacttttaaaccaagtatcgatatccatattcccccgttagacaacggcgca
tctctttcttaccggtggacggtgattgaacctaatccgaaacctagcgacttgataatt
gtgggtgacaatacagctcagcccatcatcaatgcgccatcagtaagcagcaataccaac
atcaagcttcaggcaaccattacctatacctctaccgaaggtaaagtgattactaaaaca
actgatactcagtttcaggcagtgcctgctaatgcgccaagcaaacccactcttgcgctt
agtatggctgggcatgaaagcgtatatagtggtcatgtggtgcaaccaaaaacaacggtg
atgaacgccagtggtcccctaagctatcagtggacgcaattaagtggcccaaccattacg
attgcagacgataaaacggattcaccaagttttactgctcctagcgtgagcggccatcag
gatattgtgatagaagtcgaagtgagtgatggctctgccgtagccaaagcacaaatgacg
gtgaccgtcgaccccgtggtcgcgccacccaaactaccattaacggtaaccgcctctaat
gatgcgaccattacagcaaatcagacggtgaagccaagagtcagtgttggcaatactttt
ggtacgctcagttatagctgggtagaaaccacaagttcaggcattaccctaacagatgca
aacaccgccaccccaagcttcattgctccaagtggccctgcaactgtaacccttaaagta
acggtaaatgataccgctaacggctctgcgaccgacagtgtcacttaccatgttaacgat
gccttgcaagtcaccgccggcccagcgactcgtacattggcagaaggtaatactctcaaa
ctactggcatcggttaaagatgccgatggtgcggtaagctatgcatggacaattgcagat
gccagcacaacatttctcacgacaaaaaacattaccaatgcatcctcagcgaatgcaagc
ttggacctgcccaatgtggatgccaataccaccattaaactgcaagtcacggcaacggat
tcggtcaatacggctaccgctacgatggctgtgaccattcaagatcgtcatatgagcgtc
gacttgggtgctgactttgatttgccaccgatgcaaacggggcacttgaacgcgaacgtt
gcaggggggaaaccaccctacacctatagctggacagatgatacgaatgccgtactgagc
agtaccaatgatgcgaacccatcatttatcgcgccgtttctgacccatgaagcacagctt
aactataatctcacggtaaccgacagtttaggtaatacagctaaagatagcattgtagtt
accgtacccgctttgcctttactagtcagcgctggcaatgatttttctgtagctgaaagt
ttaagtggtgtgcagttgcacggtagcgtgcaacatgccaatgcaccagtttatgcttgg
acacagatttctggcatagatgtaacccctttaataaatgcaaacactttgaatgcatca
tttacctctcctgcgaaagcggcgggcaccagcgaagacttggtatttgaactgtcggtt
accagcaatggcatagtcaaaaaagaccaagtaacagttacagtgcagggccagcccgat
ttatcggtacatgttactcctgctctttatgtcaatgaaggacaaagtgttagtttagtc
ggtacggtgatcgatgcagactcaagcagccctgcaacggtgcaaagtttaacgtggagc
caatttcctacggcggccagtcccgttacgctcagcaatagcggcgtaacgggcgatgta
cgcagtttaaccagtacctttacggcgccagcttttgctaccaacaaccaatacgtcttt
acctttacggctcaaggcacgggaaatagagtatcgaaaacggcgatggtggaagtattg
gccgcgcctagcattagtgcaggggctgatctgcgcgtgcgcgctgggcaaaccgtgaac
ttaagtgccactggcatcagcattgcgagttaccaatgggcgcaaaccgcaggctcgcca
acggttacgttaaataatgcggataaatataatccttcatttaccgcacctgatgtgacg
agtgataccacgcttacctttatcgtaacgggaacccctatcgcaggtggcgctgcacaa
caagacacgattaatgttgtggtctacgagccggctattgtggtaaggccaaaaggtgca
acaaacctaagctttacagaaggcgatcccgctttagatatcacggtcgattttgtgagt
agcgttggcaacgcaccagtgacgccaacaacgatcacttggtcggttaccccggatatg
gcacctgctggcacgttcggacctctaaatgccgctaccattggtattaacccacaagtt
ggatcggctggcacttataaacttgatattgtcgcgggtgatacgccggatcattatcag
gctggcagtcaaagttatacagtggtgatcaaatcaggtaccccgactacgccaccgcta
atagacagtagcaaactgacagctgcactcaaaagcataaacacggatctgacttcacta
aatggtatcgataagttagtgagtttgcatgcaccggcaattaccggcggcacgccaccc
tactcctatcgctggacgccgcctgccaaaggcgtggtgctaagcggtgaaacaaccgat
aacccaacggcaaccattagcaaacctgcgagcgaatgcacctatatcggaggggatatt
acgctgacggtcactgatgctaaaggtcaaacggtgagcgccaccttgcctgtcaaaaac
agccgtgggggtgatgcggttaacccaacaccgacatcaccggtgtcgtgcgatgtgtgt
cgtgggcctaaatttatctgcgagcgttcgcacaagaccgctgtctgtggctctgttgcc
gctggtaatcctgaatcattggcttccgctgagttttacaaatatcaatattgcatcaat
gatgtcgaaaacctcatcgatggatcacgttatgtgacacgtcgctgtgccactgctgaa
acagtgaataaagagctggagagccgggcaaaaaaccctgcttggctaggtaaactcact
tcggttggcactgaccccgctgttggctgtcagaagtataacgtgcacgatttacaagat
gcgcattttagttgctccttcgtctgtaaagggaaagtcggtggtgggttcgattcaggt
ggcgctcgcgggtgtaatattgaaaccgtaccggcagtcagcaacaattcaatacagtta
tcagagagcgattacccagtgccaacagcgccggccacgattcctggcaccggctcgcca
ggtacctgtcctaacggtattcaacctgcgatgtaa
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