Shewanella carassii: TUM17387_26140
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Entry
TUM17387_26140 CDS
T07543
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
scaa
Shewanella carassii
Pathway
scaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TUM17387_26140 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scaa01007
]
TUM17387_26140 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_26140 (hisS)
Enzymes [BR:
scaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
TUM17387_26140 (hisS)
Amino acid related enzymes [BR:
scaa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
TUM17387_26140 (hisS)
Transfer RNA biogenesis [BR:
scaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TUM17387_26140 (hisS)
Prokaryotic type
TUM17387_26140 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
XFP_C
DUF29
Motif
Other DBs
NCBI-ProteinID:
BCV67255
LinkDB
All DBs
Position
complement(2955249..2956526)
Genome browser
AA seq
425 aa
AA seq
DB search
MAKQIQAIRGMNDILPTQSPVWQKVEAVLRASVASFGYSEIRTPIVENTDLFKRSIGEVT
DIVEKEMYTFADRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKG
RYRQFHQFGVEVYGIKSADIDAEVLMLSASLWQKLGLTEHVSLELNTLGDSDERAAYREA
LVAFLEQHKDKLDEDSQRRMYSNPLRVLDSKDQQVQALLADAPALMDYLGEDSKAHFARL
CELLEAVGIQYKVNPRLVRGLDYYNRTVFEWVTDSLGAQGTVLAGGRYDGLVSQLGGKET
PAVGFAMGLERIVLLLETLELNADVAAEVDVYVTAMGDDCVIEAMKIAQELREKLPKLKV
MSHCGGGNFKKQMKRADKSGAGFALIIGETELANNKVAVKPLRGDGAQQDVERQALADYL
AELIK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacagatccaagcgattcgcggaatgaatgacattctgccaactcaaagcccc
gtatggcaaaaagtggaggcggtactgcgcgcctcggttgcctctttcggttacagtgaa
atccgcacacctatcgttgagaacacagacctgttcaagcgttcgataggggaagtgaca
gatattgtcgagaaggagatgtacaccttcgccgatcgcaacggtgacagcctcaccctg
cgcccggaaggcaccgcctcgacagtccgcgccggtaacgaacatggcctcttgtacaac
caggaacagcgtctgtggtatatgggccctatgttccgccacgagcggccacagaaaggg
cgctatcgtcagttccatcagttcggggttgaagtttatggcattaagagcgccgatatc
gacgccgaagtgttgatgttgtctgcctctttgtggcagaagcttggattgaccgaacat
gtttcgctcgagctgaacactctgggtgacagcgacgagcgcgccgcctatcgtgaagcg
ctggtggccttcctcgagcaacataaagacaagctggatgaagacagccagcggcgcatg
tacagcaacccactgcgggtactggactctaaagatcagcaggttcaggccttgctggcc
gatgctccggcgctgatggactacctgggtgaagactccaaggcacattttgcccgcttg
tgtgaactcctggaggccgttggtatccaatacaaggttaacccacgcctggtacgcgga
ttggattactacaaccgcaccgtatttgagtgggtcaccgatagtttaggcgctcagggc
actgtgctggccggtggtcgttacgacggtctggtgagccagcttggcggtaaagaaacg
ccggcagtgggctttgccatgggactggagcggattgttctgctgctggaaaccctagag
ctgaacgccgatgttgctgccgaagtggatgtctacgtgaccgccatgggcgatgactgc
gtaattgaggcgatgaaaattgcccaagaactgcgtgagaagctgcccaagcttaaggtg
atgagtcactgcggtggtggcaacttcaagaaacagatgaaaagagccgataagagcggc
gcgggttttgcgctgattatcggtgagaccgaactggccaacaataaggtggcggtgaaa
ccgctgcggggtgatggcgctcagcaggatgttgaacgccaggccctggccgactatttg
gcagaactgattaaataa
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