Shewanella carassii: TUM17387_26630
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Entry
TUM17387_26630 CDS
T07543
Name
(GenBank) LysR family transcriptional regulator
Organism
scaa
Shewanella carassii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_30
PBP_like
HTH_24
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
BCV67304
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Position
3012039..3012920
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AA seq
293 aa
AA seq
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MDIRQLKHLDTLVKYGSFTRAAEKLNLAQPALSQSIKRLEQSLGVTLVDRSGSRQESGIR
LTAEGLALHQHAVLILKQLSQAEAHIRAMAELAKGEVRIAVPGMLGSFYLPSRVMAFRHQ
YPDLKLSLFEGGTRDALRMLEQEEVDIAIITANDLKPEFESCLLVKEQMVVASSPEHPLA
TNEAVTLEQFFAHELVMFKPGYFHREWMLSRARELQLEPRIAFETNLINLIKQIVSQGFA
VTSVLEMVVNERDDIIALPFSPPVHLDLHIAWKKQRPVSQADRAFVEFLLANK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtggatatcagacaattaaaacacttagataccttggttaaatacggcagttttacccgg
gcggcagagaaactgaacttggcccaacccgccctcagtcagagtatcaaacgactggaa
caatccctcggtgtcactctggtcgatcgcagtggcagtcgtcaggagagtggcattcgc
ctcactgccgaggggctggcgctgcatcaacatgcggtattgatcctcaaacagctgagt
caggccgaggcgcatattcgggccatggccgagctggccaagggggaagtgcgaattgcc
gtgcccggtatgttgggctctttctacctgccatcacgagtgatggcttttcgccatcag
tacccggacttgaagctgtcgctgtttgagggaggtacccgcgatgccctgaggatgctg
gagcaggaagaggtagacatagccatcattaccgccaatgacctcaagcccgaattcgaa
tcctgtctactggtcaaagagcagatggtggtggcttcaagccctgaacaccccttggcc
acgaacgaggccgtaacgctagagcagtttttcgcccacgagttggtgatgttcaaaccc
ggttattttcatcgtgaatggatgctgagccgagccagagagctgcaactcgagcctagg
atcgcctttgaaactaacctgatcaacctgataaaacagattgtcagtcaaggatttgcc
gtcaccagcgtgttggaaatggtggtcaatgaaagggatgacatcatagccctgcccttc
tcaccgcctgtacatctcgacctgcatattgcctggaagaagcagcgcccggtgagccag
gccgaccgggcctttgtagagtttttgttggccaataaataa
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