Shewanella carassii: TUM17387_27730
Help
Entry
TUM17387_27730 CDS
T07543
Symbol
mscS
Name
(GenBank) mechanosensitive ion channel protein
KO
K03442
small conductance mechanosensitive channel
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_27730 (mscS)
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_27730 (mscS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st_1
MS_channel_1st
DUF5389
DUF3483
Motif
Other DBs
NCBI-ProteinID:
BCV67414
LinkDB
All DBs
Position
complement(3140180..3141004)
Genome browser
AA seq
274 aa
AA seq
DB search
MENLEGLLQQAPELIAAYGIKILLAIVIFFVGKYLSNVAKKVTAKVLSKRKIDQTVVSFV
ANMAWAVVFVFTVIATLGQIGIQTASLVAVLGAAGLAVGLALQGSLSNFAAGVLMVLFRP
CRVGDYIEAAGVAGTVDEITIFSTRLKTPDNKVIIVPNSTIMNGSITNYSAMDKRRIDLV
IGVSYDADIRHTKQILTSILDNHEKVLKEPGYTVGLHTLADSSVNYVVRPWVKSADYWGV
YFELMEQIKQSLDDNGIGIPYPQMDLHVKELPSK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctcgaagggctattgcaacaggcgcctgagttaatagcagcctacggcatc
aagatattgcttgccattgttattttctttgtcggtaaatatctgtctaatgtggccaag
aaggttacggctaaagtattgagtaaacgcaagatagaccaaaccgtggtttcttttgtg
gccaatatggcttgggcagtggtgtttgtgttcacggttatcgctactttggggcagatt
ggaattcagaccgcgtctctggttgcggttctcggtgccgctggtttggccgtgggttta
gcgctgcaaggctcactatctaactttgccgccggggtcttgatggttctgttccgccct
tgccgcgtgggagattatattgaagctgcgggtgttgccggtactgtcgatgaaatcact
atcttttcaactcgtctgaaaaccccggataacaaggtcatcatagtgcccaactccact
atcatgaacggtagcatcaccaactactcggctatggacaagcgccgcatcgatctggtg
atcggggtttcttacgatgcagatatccgtcataccaagcagatactgactagcattctc
gataaccatgaaaaagtactgaaagagcctggttatacagtcggtctgcacaccttggct
gactcttcggtcaactatgtggttcgcccttgggtgaagtctgctgattactggggtgtc
tacttcgagctgatggagcagattaaacaatctctggacgacaacggcattggcatccct
tatcctcagatggatctgcatgtcaaagagttgccttccaagtaa
DBGET
integrated database retrieval system
