Shewanella carassii: TUM17387_28300
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Entry
TUM17387_28300 CDS
T07543
Name
(GenBank) diguanylate cyclase
Organism
scaa
Shewanella carassii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS
5TM-5TMR_LYT
PAS_4
PAS_8
PAS_11
TIC20
Diguanyl_cycl_sensor
PAC_bac
ThiW
Motif
Other DBs
NCBI-ProteinID:
BCV67471
LinkDB
All DBs
Position
complement(3199708..3202758)
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AA seq
1016 aa
AA seq
DB search
MEQSIFLPLTQNAAFLLALVFIYDAIPRQKQQEYFLLWRVLVGIIIGGICIAVMLTPWHY
EPGIFFDSRSVLLSISGLFFGGLPTLIACVITAAFRIYLGGGAVLVGVGVIFSSGLIGLL
WRKRRKQSLADIGYLELTSFSLLVHLVMLAWMLLLPWDTAKGVLASISLPVLTLFPLTNV
LLGRLLSRRLELERDSRVQLQDDFLFRSQFHVGNIGISITSPDQRWLKINPYLCQMLGYS
ERELSHMTWGELTHPDDLPADMAQFRRMLDGEIDEYEMEKRFVSKMGRYVYTHMTVACQR
QHNQVQLVIAGYIDITSAKLAEQAIAASREQLELVLQSGQLGFWDWDLVKDTVARNERSA
EILGYSLKQVNDNKRLWVDGIHPQDRAWVLRSLDEHLAGRTEQHKVQYRLIRPDGEQRWV
QDTGRVVNRDKEGKPLRVCGVHVDITEQKQLEESLKLAASVYENSCEAMSVLDEAGTIMT
VNSAFSAITGFQPEDVLGKDIEILKCHDHSDQFYQELEQELSQKGRWQGEMWLACKDGRK
IMIWLTINTIQSDDGQLRRVALFSDITDKKQNERLIWRQANYDALTGLPNRRMFTEQLGN
EIRKAKRHDHGFALLFLDLDFFKEVNDTLGHDMGDLLLVETSERLRTCVRESDVVARLGG
DEFTLLLSDVQDHNGVERVANHILSSLAEPFKLGDETAFISASIGITLFPEDGQTAELLL
KHADQAMYAAKDQGRNRFNYFTASMQEYARYRMRLIQDLRQAMERREFELRFQPIVELGS
GRVFKAEALLRWNHSERGSVSPAEFIPIAEDTGLIFDIGNWVFEQAARQSAAWRETYGRE
VQISINKSPIQFRDEENRFTEWLELLASLGVSGSGICIEITEGLLLDAKMGVSDKLLAYR
DAGIQVSLDDFGTGYSSLAYLKRFDIDYLKIDQSFTKNLETDESNLTLCEAIIVMAHKLG
MKVIAEGVETSGQAEILTRIGCDYAQGYLYSQALDTQAFEQKYLGNHQSSGGGNAS
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagcattttccttccgttaacacaaaatgctgcatttttgctggcattggtc
tttatttacgatgcgatacccaggcaaaagcaacaggaatactttttgttgtggcgtgtg
ttggtcggcatcattatcggcggtatctgtatcgcggtgatgctgactccctggcattat
gagccggggatcttcttcgacagtcgttcagtacttttaagtatttcgggtttgttcttc
ggcggcctgccgacgctgattgcctgcgtgattaccgctgcttttcgcatctatctcggt
ggcggtgctgtgctggtgggcgttggggtgatcttctccagcggcttgataggccttctg
tggcgtaaacggcgcaagcaatccctcgccgatatcggctatctggagctgactagtttt
tctctgttggtgcatctggtgatgctggcctggatgttgctgctgccctgggataccgcc
aaaggcgttttggccagtatcagtctgcctgtgttgactctgtttccgctcaccaatgtg
ttgttggggcgtttgctttccagacgtttggaattggagcgtgacagtcgggtgcagtta
caggatgactttctgtttcgttcccagtttcatgtgggcaacatagggatttccatcacc
tcaccggatcaacgttggctcaagataaatccctatctgtgtcagatgttgggctattca
gaacgcgagttgtctcatatgacttggggggagttgacccaccccgatgatctgcctgcc
gatatggcgcagttccggcggatgctggatggggagatcgacgagtatgagatggaaaaa
cgcttcgtttccaagatggggcgttatgtttatacccatatgacagtggcctgtcagcgt
cagcataatcaagtgcaactggtgatcgccggctatatcgacatcacctcggccaagttg
gcagaacaggccatagccgccagtcgtgaacaacttgaactggtgctgcaaagcggccag
cttggcttctgggattgggatcttgttaaggatactgtggcccgtaatgaacgtagtgcc
gagatcctcggttattcactcaaacaggtgaatgataataagcggctgtgggttgatggt
atccatcctcaagacagggcttgggtgctgcgttctttggatgagcatctggcggggcga
accgagcaacacaaggtgcagtatcgcttgatccgcccggacggtgaacagcgttgggtg
caggacaccggcagagtggttaaccgcgacaaagaagggaaaccactgcgggtttgcggc
gtgcatgtggatattaccgagcagaagcagttggaggaatcgcttaagttggcagcttct
gtctatgagaactcctgcgaggcgatgagcgtattggatgaagccggtaccataatgaca
gtcaactcggcattcagcgccatcacagggtttcaacccgaagatgtgctgggtaaagac
atagagatactcaaatgtcacgatcacagcgaccagttttatcaggagttggagcaggaa
ctcagtcaaaagggccgttggcagggggagatgtggcttgcctgtaaagatggtcgtaag
atcatgatttggttgaccatcaataccattcaaagtgatgatgggcagctgagaagagtg
gcgttgttttccgatattaccgacaaaaaacagaatgaacgcctcatctggcgccaggcc
aactatgatgccctgacaggcctgccaaaccggcgcatgttcaccgagcagttgggcaat
gaaattcgtaaggccaagcgtcatgaccatggttttgcgttgctgtttctggatctggat
ttcttcaaagaggtcaacgataccctggggcatgacatgggtgatctgttactggtggaa
acctcggagcggctgcggacttgtgtccgtgaatccgatgtggtcgccagactcggcggc
gatgagtttacccttttgttatcggatgtgcaggatcataatggggttgagcgggtcgct
aatcatatcctcagtagtctggccgagcctttcaagttgggcgatgagaccgcctttatc
agtgccagtatcggcatcaccttgttccctgaagatggccagacggctgaactgttgctc
aaacatgccgatcaggccatgtatgccgccaaagatcagggccgcaatcgcttcaactat
ttcaccgcctcgatgcaggaatacgccagatatagaatgcggcttatccaggatttgcgt
caggccatggagcggcgtgagtttgaactcaggttccaacccatagtcgagctgggcagc
ggtcgggtgttcaaggccgaagccttgctgcgttggaatcatagcgagcgtggcagtgtt
tcgccggcagagtttatccctattgcagaagacactgggttgattttcgatatcggcaac
tgggtgttcgaacaggcggcgcgtcagagtgccgcctggcgtgaaacctatggccgcgag
gtgcagatcagtatcaataagtcgccgatccagtttcgcgatgaagaaaacagatttaca
gaatggttggagttgcttgccagtctgggggtctcgggctcggggatctgcatcgaaata
accgaaggcctgttgttggatgccaaaatgggagtcagtgataaattgttggcctaccgg
gatgccggcattcaggtgtctctggacgactttggtacaggctactcttccctggcgtat
ctgaaacgatttgatattgattatctcaaaatagatcaatcatttaccaagaatttggaa
acagatgagagcaacctgaccctctgtgaggctatcatagtcatggcgcacaaactgggg
atgaaggtgatagccgaaggagtagagacaagcggtcaggccgagatcttgacccgtata
ggttgtgactatgctcagggctacctctactcccaggcgctggatacccaggccttcgag
caaaaatatcttggcaatcatcagagcagcggcggtggaaatgccagctga
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