Shewanella carassii: TUM17387_28490
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Entry
TUM17387_28490 CDS
T07543
Symbol
rsmB_2
Name
(GenBank) tRNA/rRNA cytosine-C5-methylase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scaa03009
]
TUM17387_28490 (rsmB_2)
Enzymes [BR:
scaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
TUM17387_28490 (rsmB_2)
Ribosome biogenesis [BR:
scaa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TUM17387_28490 (rsmB_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
RsmF-B_ferredox
Methyltransf_25
Ubie_methyltran
Tho1_MOS11_C
Motif
Other DBs
NCBI-ProteinID:
BCV67490
LinkDB
All DBs
Position
3218619..3219935
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AA seq
438 aa
AA seq
DB search
MTAPSPSLTPAQKRAASYANTINTLFTEILDSRQSADRVLANYFRSNKKHGSKDRRVIRE
TLFALFRWWGWLQQLENGDEQSLWFQRLALAAAIETHPWTDIICAWQQQAGKSFALPEQA
LAPKAAAELVSKVSGRHVLARDLAPDWFWHAVAPLPEAREELLIDALCSRPPIWARVQNM
PLSKALAELRSAGVDASAAPVFKDAISLGSKSINLNEIRLFKEGFIEVQDLASQVIGQVC
APRAGENWWDACSGAGGKSLQLSSLMQQDSAAKGVFGTITASDIRTAALNELEKRAKRAG
FNIKVAPWRSDALPVAREAFDGVLVDAPCSCTGTWRRNPDMRWLDDSQAISDKPTLQLDI
LSRACDAVKPGGTLVYATCSLADSENRQVVDAFLAKRPEFTLETLSHPFNGEQTQYLTIW
PFEANADGMFVVRFHKQG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgcgccaagcccttcactgactccggcccaaaaacgtgccgccagttatgccaac
accatcaacacactgttcaccgaaatcctcgacagtcgccagagtgccgatcgggtgctg
gcgaactatttccgcagcaacaagaaacacggctccaaggacagaagagtcattcgagag
accctgtttgccctatttcgttggtggggttggttgcaacagcttgagaatggcgatgag
caaagcctgtggttccagcgcctggcattggcggcggcgatagaaacccacccttggacg
gacattatctgtgcctggcagcaacaagcaggcaagtcattcgccctgcctgagcaggct
ctggcccccaaagccgccgccgaattggtatccaaggtctctggccgacatgtcttggca
agagacctagcaccggactggttctggcatgccgtggcgccgctgccagaggcccgggaa
gagctgctgatagacgcgctttgcagccgcccgcctatctgggccagggtgcaaaatatg
ccgctgtccaaggccctggccgagctcagaagcgccggagtcgatgcaagcgccgccccc
gtcttcaaggacgccatcagccttggcagcaagagtatcaatctcaatgaaatcagactc
tttaaagaaggttttattgaagtgcaggatctggcctcccaggtcataggccaggtttgc
gccccaagagccggcgaaaactggtgggacgcctgctccggcgccggtggcaagagcctg
caactcagctcgctgatgcagcaagatagcgccgccaaaggcgtttttggcactattacc
gcctcggatatccgcacggcagcgctcaatgaattggaaaaacgcgccaaacgcgccggt
ttcaacatcaaggtcgcgccttggcgcagcgatgccctgccggttgccagagaagccttt
gacggcgtgctggtcgatgccccctgcagctgcaccggcacctggcgccgaaatccggac
atgcgctggttggatgacagccaagccatcagcgataaacccacgctgcagctcgacata
ctcagccgcgcctgcgatgcagtcaagccaggtggcactttggtttacgccacctgctca
ctggcggacagcgaaaaccgccaggtggtcgatgccttcctggccaagcggcccgagttt
actctggaaacgctcagccacccattcaacggtgaacagacgcagtatttgacgatttgg
ccctttgaagccaatgccgatgggatgtttgttgttcgttttcataaacaaggctag
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