Shewanella carassii: TUM17387_29030
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Entry
TUM17387_29030 CDS
T07543
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
scaa
Shewanella carassii
Pathway
scaa00220
Arginine biosynthesis
scaa00240
Pyrimidine metabolism
scaa00250
Alanine, aspartate and glutamate metabolism
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
TUM17387_29030 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TUM17387_29030 (carB)
00220 Arginine biosynthesis
TUM17387_29030 (carB)
Enzymes [BR:
scaa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
TUM17387_29030 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
RimK
CoA_binding_2
HTH_23
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BCV67544
LinkDB
All DBs
Position
complement(3284013..3287234)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLKEFDVEMIGATA
DAIDKAEDRARFDKAMKSIGLECPRAGIAHSMEDAHKVLDQVGFPCIIRPSFTMGGSGGG
IAYNVEEFEDICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPM
GVHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGLTPASFEPSIDYVVTKIP
RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESMQKALRGLETGMTGFDPIVDINEPEA
LAKIRYELQDVGPERPWYIADAFRAGMSMEGIRRITNIDPWFLVQIEDLVLQEEKVKEGG
WSGLSKEFLRKLKRKGFSDARLASLLGVSESEVRKLRHKYELFPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQAVERLGLKQPENSTVTNLEQAVLDAERIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGKDVVIGGIMEH
IEQAGVHSGDSGCSLPPYTLSKAIQDEMREQVRKLALELGVVGLMNVQFAVKSDVIYLIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGTSLAEQQHTQEVIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGSVKDVPKSGRALLSVRHSDKKRVSDLA
AKLIELGYELDATHGTAVVLGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQ
AIEDSRQLRRGALQHKVNYTTTMNAAFATCMAHDADDRSNVASVQELHARVNK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgatattcaaagtattcttatcctgggtgccggcccaatcgttatc
ggtcaggcctgtgagtttgactattcgggagcccaggcctgtaaggcgctgagagaagag
ggttaccgggttattctggtgaactccaaccctgcaaccattatgacagacccagaaatg
gccgatgccacatacatcgagcctatccactgggaagtggtgcgcaacattatcgccaaa
gaacgccccgatgcgattctgccaaccatgggcggtcagacggcgctgaactgcgccctg
gaactggaagccaaaggcgtattgaaagagtttgacgtcgagatgatcggtgccactgcc
gatgccatcgacaaggccgaagatcgtgcccgttttgacaaggcgatgaagagtatcggc
ctcgagtgtccccgtgccggtattgcccacagcatggaagatgcacacaaggtgctggat
caagtgggctttccctgcatcattcgcccctctttcaccatgggtggcagcggcggcggt
atcgcttacaacgtcgaagagtttgaagatatctgtacccggggtctggatttgtcgccg
accaatgagctgctgattgacgagtcgctgattggctggaaagagtatgagatggaagtg
gtgcgcgatcgcaacgacaactgcatcatagtctgcgccatcgaaaactttgaccccatg
ggcgtgcacacaggtgactccattaccgtggcaccggcccagaccctgaccgacaaagaa
tatcaactgatgcgtaacgcctccatggcggtgctgcgggaaatcggcgttgaaaccggt
ggttccaacgtgcagtttggtatcaaccccaaagatggtcgcatggtgatcatcgagatg
aacccaagggtatcgcgctcatctgcgctggcctccaaggcgaccggtttcccgattgcc
aaggttgcggccaagctggcggtgggctttaccctggatgagctgatgaacgacattacc
ggcggtctgaccccggcttcgttcgagccctctatcgactatgtggttaccaaaatccct
cgcttcaacttcgagaagtttgccggttccaacgaccgcctgaccactcagatgaagtct
gtcggtgaagtgatggccatcggccgtaccttccaggagtcgatgcaaaaagctctgcgc
ggcctggaaaccgggatgacaggttttgaccctatcgtggatatcaacgagccggaagcc
ctggccaagatacgttacgaattgcaggatgtgggccctgagcgtccttggtatatcgcc
gatgctttccgtgccggtatgtccatggaaggtattcgccgcatcaccaacatagaccct
tggttcctggtgcagattgaagatctggtactgcaggaagagaaggtcaaggaaggcggc
tggagcggtctttccaaagagttcctgcgcaaactgaagcgtaaaggtttctccgatgca
cgcctggcgtcactgctgggggtttctgaaagtgaagtgcgcaaactgcgtcacaagtat
gagctcttccctgtttacaagcgggtagatacctgcgccgccgagttcgccacggatacc
gcctacatgtactccacctacgaggaagagtgtgaggccaatccgtccgataaagacaag
atcatggtgataggtggcggccccaaccgtatcggtcagggtatcgagttcgactactgc
tgtgtgcacgcagcgctggcgatgcgtgaagacggctatgaaaccatcatggttaactgt
aaccctgaaaccgtttccaccgactatgacacctctgacagactctactttgaacctgtt
accctggaagacgtactggaaatcgtgcgggttgagcagcccaaaggggttatcgtgcag
tatggtggccaaacgccactgaaactggcccgcgccctggaagccgcaggtgtgcccatc
atagggaccagcccggatgccatcgaccgcgccgaagaccgtgagcgcttccaacaagcg
gttgagcgtttggggctgaaacagcctgaaaacagcacagtgaccaacctggagcaggcg
gtactggatgccgagcgtataggttatcctctggtggttcgtccctcctatgttctgggt
ggccgggcgatggaaatcgtttacgacgagcaggatctgcgccgttacttcaacgaagcc
gtgagcgtatccaacgagtcgccggtactgctggaccgcttcctggatgacgccaccgaa
gtagacgtggacgccatctgcgatggtaaagacgtggttatcggcggcatcatggagcat
atcgagcaggccggtgttcactcaggtgactcaggttgttcactgcctccttacactctc
tccaaggcgattcaggacgagatgcgcgagcaggtacgcaagctggcgctggagctgggc
gttgtcggtctgatgaacgtgcagtttgcggtcaagagcgacgtgatttacctgattgag
gtaaatccgcgcgccgcccgcacagtgcctttcgtttccaaggccacaggtgtgcctctg
gccaagattgccgcccgggtaatggccggcacttcactggccgaacagcaacatactcag
gaagtgatcccgccttactactcagtgaaagaagtggttctgccgttcaacaagttcccg
ggtgttgaccctctgctcggccctgaaatgcgctctaccggtgaggtgatgggtgtgggt
gataccttcgccgaagcctacgccaaggcgcaactgggctcagtgaaagatgtgcccaag
tcaggtcgcgccctgttgtctgttcgtcacagcgacaagaagcgggtttcggatctggcg
gccaagctgattgaactcggctatgagctggatgccacccacggcacggctgtggtgctg
ggtgaagcgggtatcaatccccgcctggtgaacaaggtgcatgaaggtcgtccacacatt
cttgaccggatcaagaacggtgaatacacctacatagtgaataccacagagggtcgtcag
gccatcgaggattccagacagctgcgccgcggcgcgctgcagcacaaggtgaactacacc
accaccatgaacgcggcttttgcaacctgtatggcccatgatgccgacgacagaagcaat
gttgcctcggtgcaggaactgcacgccagagtcaacaagtaa
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